RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 PGDP52209 483 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 SLC7A2P52569 658 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 DUSP8Q13202 625 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 TGIF1Q15583 401 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 C6orf120Q7Z4R8 191 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 SLC15A3Q8IY34 581 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 MORN4Q8NDC4 146 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 SIMC1Q8NDZ2 872 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 OR7G1Q8NGA0 311 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 GIMAP5Q96F15 307 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 MAGED4Q96JG8 741 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 CNPPD1Q9BV87 410 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 GPATCH2Q9NW75 528 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 CMTM6Q9NX76 183 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 TMEM181Q9P2C4 612 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 PRPF19Q9UMS4 504 aaKnown RBP13.1□□□□□ -0.31
SHMT2-203ENST00000449049 PPIEQ9UNP9 301 aaKnown RBP13.1□□□□□ -0.31
SHMT2-203ENST00000449049 CORO2BQ9UQ03 480 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 ERVK-19Q9WJR5 959 aa13.1□□□□□ -0.31
SHMT2-203ENST00000449049 IGHV3-20A0A0C4DH32 117 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 NME4O00746 187 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 SOCS6O14544 535 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 BCAS2O75934 225 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 IGKV3-11P04433 115 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 ADRB1P08588 477 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 GPX2P18283 190 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 TP53BP2Q13625 1128 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 EXOSC7Q15024 291 aaKnown RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 PCOLCEQ15113 449 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 PAPD4Q6PIY7 484 aaKnown RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 PPP1R32Q7Z5V6 425 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 NFAM1Q8NET5 270 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 OR52N2Q8NGI0 321 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 SLC2A12Q8TD20 617 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 ZNF721Q8TF20 911 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 KIAA1143Q96AT1 154 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 C8orf44Q96CB5 159 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 SENP5Q96HI0 755 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 ART5Q96L15 291 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 ZNF700Q9H0M5 742 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 RAD21L1Q9H4I0 556 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 KAT8Q9H7Z6 458 aaKnown RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 GPN2Q9H9Y4 310 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 AP3M1Q9Y2T2 418 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 IGHV1-45A0A0A0MS14 117 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 EVPLLA8MZ36 301 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 GSC2O15499 205 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 COQ9O75208 318 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 DNAJC8O75937 253 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 COX6A1P12074 109 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 SSTR4P31391 388 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 MAGEA8P43361 318 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 GPR143P51810 404 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 EEF1A2Q05639 463 aaKnown RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 WLSQ5T9L3 541 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 BNC2Q6ZN30 1099 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 SZRD1Q7Z422 152 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 RNF130Q86XS8 419 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 ZNF615Q8N8J6 731 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 OR52R1Q8NGF1 315 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 OR1N1Q8NGS0 311 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 PNPT1Q8TCS8 783 aaKnown RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 MIPOL1Q8TD10 442 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 SLC35G5Q96KT7 338 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 LPAR4Q99677 370 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 THUMPD3Q9BV44 507 aaKnown RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 CADM1Q9BY67 442 aaKnown RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 IL17BQ9UHF5 180 aa13.09□□□□□ -0.31
SHMT2-203ENST00000449049 MRPS18BQ9Y676 258 aaKnown RBP13.09□□□□□ -0.31
SHMT2-203ENST00000449049 SEC16AO15027 2179 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 PRAMEF2O60811 474 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 HMGN2P05204 90 aaKnown RBP13.08□□□□□ -0.32
SHMT2-203ENST00000449049 LIFP15018 202 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 CALRP27797 417 aaKnown RBP13.08□□□□□ -0.32
SHMT2-203ENST00000449049 EMDP50402 254 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 PRKAG1P54619 331 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 FADDQ13158 208 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 CLN3Q13286 438 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 IL10RAQ13651 578 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 RGNQ15493 299 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 EXOSC6Q5RKV6 272 aaKnown RBP13.08□□□□□ -0.32
SHMT2-203ENST00000449049 MFSD12Q6NUT3 480 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 KIRREL2Q6UWL6 708 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 ARHGAP24Q8N264 748 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 C10orf111Q8N326 155 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 ZNF321PQ8N8H1 164 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 B3GNT7Q8NFL0 401 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 ADAMTS17Q8TE56 1095 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 HOXB13Q92826 284 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-203ENST00000449049 CDRT15Q96T59 188 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 EFHD1Q9BUP0 239 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 OR8D2Q9GZM6 311 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 OR10A5Q9H207 317 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 SERHL2Q9H4I8 314 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 L3MBTL1Q9Y468 752 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 DCHS1Q96JQ0 3298 aa13.08□□□□□ -0.32
SHMT2-203ENST00000449049 CREG1O75629 220 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 OTX2P32243 289 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 SLC37A1P57057 533 aa13.07□□□□□ -0.32
SHMT2-203ENST00000449049 EEFSECP57772 596 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms