RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 VMP1Q96GC9 406 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 PPP3R2Q96LZ3 170 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 KCNC2Q96PR1 638 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 CCT8L2Q96SF2 557 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 NSRP1Q9H0G5 558 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 TCF7L2Q9NQB0 619 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 KLHL14Q9P2G3 628 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 FBXW2Q9UKT8 454 aa12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 YARS2Q9Y2Z4 477 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-213ENST00000448520 SPG11Q96JI7 2443 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 TRBV11-1A0A0K0K1C0 115 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 A0A1B0GTH9 108 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 NPIPB8E9PQR5 432 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 PCDH7O60245 1069 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 PRKRAO75569 313 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 ITGA10O75578 1167 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 ZFAND5O76080 213 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 MYO1DO94832 1006 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 TPOP07202 933 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 LBPP18428 481 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 HIST1H1TP22492 207 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 PTGER1P34995 402 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 ARFIP2P53365 341 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 DIO3P55073 304 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 MTTPP55157 894 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 TGM3Q08188 693 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 SLAMF1Q13291 335 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 CCNYL2Q5T2Q4 361 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 IL23RQ5VWK5 629 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 NOXRED1Q6NXP6 359 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 ARHGAP11AQ6P4F7 1023 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 ACAD11Q709F0 780 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 FGD2Q7Z6J4 655 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 NUDT13Q86X67 352 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 GPALPP1Q8IXQ4 340 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 CYP4Z2PQ8N1L4 340 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 ZFP62Q8NB50 900 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 CDC26Q8NHZ8 85 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 ACTRT2Q8TDY3 377 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 EGLN2Q96KS0 407 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 FCRL1Q96LA6 429 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 MAPKAP1Q9BPZ7 522 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 TREX2Q9BQ50 279 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 CENPKQ9BS16 269 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 TBCDQ9BTW9 1192 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 DDX31Q9H8H2 851 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 COPS7BQ9H9Q2 264 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 MCCC2Q9HCC0 563 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 TIMMDC1Q9NPL8 285 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 PRTFDC1Q9NRG1 225 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 PNO1Q9NRX1 252 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 NMRK1Q9NWW6 199 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 BAIAP2L1Q9UHR4 511 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 ITGB1BP2Q9UKP3 347 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 MRPS33Q9Y291 106 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 CSMD2Q7Z408 3487 aa12.74□□□□□ -0.37
PDLIM2-213ENST00000448520 PHF3Q92576 2039 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 HS6ST1O60243 411 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 SNX3O60493 162 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 SCELO95171 688 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 CD1EP15812 388 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 SDC1P18827 310 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 SSR4P51571 173 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 GPR143P51810 404 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 NME5P56597 212 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 TLE4Q04727 773 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 SPIN4Q56A73 249 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 C3P1Q6ZMU1 363 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 MEX3BQ6ZN04 569 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 SCUBE1Q8IWY4 988 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 ZNF595Q8IYB9 648 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 TMEM132CQ8N3T6 1108 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 LIX1Q8N485 282 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 C7orf57Q8NEG2 295 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 LILRB4Q8NHJ6 448 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 C16orf78Q8WTQ4 265 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 RILPQ96NA2 401 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 TSSK3Q96PN8 268 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 SERINC2Q96SA4 455 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 CSF3RQ99062 836 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 CCT7Q99832 543 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 CCDC28BQ9BUN5 200 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 TP63Q9H3D4 680 aaPredicted RBP12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 PFDN4Q9NQP4 134 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 TEX10Q9NXF1 929 aaPredicted RBP12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 AHSPQ9NZD4 102 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 TACC2O95359 2948 aa12.73□□□□□ -0.37
PDLIM2-213ENST00000448520 GNG14A0A1W2PPG7 69 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 A0A1W2PR48 441 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 WASHC1A8K0Z3 465 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 A8MVJ9 347 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 C9JVG2 144 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 ZNHIT1O43257 154 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 B3GALT2O43825 422 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 CDC40O60508 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 LRATO95237 230 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 FAM107AO95990 144 aa12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 ANXA4P09525 319 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-213ENST00000448520 FAM58BPP0C7Q3 252 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms