RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 BCAP29Q9UHQ4 241 aa13.04□□□□□ -0.32
CTSS-202ENST00000448301 PCDHGB4Q9UN71 923 aa13.04□□□□□ -0.32
CTSS-202ENST00000448301 C19orf53Q9UNZ5 99 aaPredicted RBP13.04□□□□□ -0.32
CTSS-202ENST00000448301 ARL2BPQ9Y2Y0 163 aa13.04□□□□□ -0.32
CTSS-202ENST00000448301 PCDHGA9Q9Y5G4 932 aaKnown RBP13.04□□□□□ -0.32
CTSS-202ENST00000448301 NUP214P35658 2090 aaPredicted RBP13.04□□□□□ -0.32
CTSS-202ENST00000448301 MGAQ8IWI9 3026 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 CCDC154A6NI56 674 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 A6NL46 340 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 UPK1AO00322 258 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 NR5A2O00482 541 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 CFLARO15519 480 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 PRKNO60260 465 aaPredicted RBP13.03□□□□□ -0.32
CTSS-202ENST00000448301 COQ9O75208 318 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 PSMG1O95456 288 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 UBAP2LQ14157 1087 aaKnown RBP13.03□□□□□ -0.32
CTSS-202ENST00000448301 LINC00303Q3SY05 128 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 CRB2Q5IJ48 1285 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 GKAP1Q5VSY0 366 aaPredicted RBP13.03□□□□□ -0.32
CTSS-202ENST00000448301 ANKRD46Q86W74 232 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 SIRT6Q8N6T7 355 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 SIMC1Q8NDZ2 872 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 OR5L2Q8NGL0 311 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 OR4A15Q8NGL6 344 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 GOT1L1Q8NHS2 421 aaPredicted RBP13.03□□□□□ -0.32
CTSS-202ENST00000448301 C16orf52Q8NHV5 167 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 SFXN5Q8TD22 340 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 TSPEARQ8WU66 669 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 TTC9Q92623 222 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 MOAP1Q96BY2 351 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 ZNF552Q9H707 407 aaPredicted RBP13.03□□□□□ -0.32
CTSS-202ENST00000448301 CXorf36Q9H7Y0 433 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 RMND5AQ9H871 391 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 C3orf14Q9HBI5 128 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 SLC52A3Q9NQ40 469 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 PRODH2Q9UF12 536 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 TEKT2Q9UIF3 430 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 PKD1L2Q7Z442 2459 aa13.03□□□□□ -0.32
CTSS-202ENST00000448301 TNRC6AQ8NDV7 1962 aaKnown RBP13.02□□□□□ -0.33
CTSS-202ENST00000448301 EXPH5Q8NEV8 1989 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 DSPP15924 2871 aaKnown RBP13.02□□□□□ -0.33
CTSS-202ENST00000448301 TMEM200CA6NKL6 621 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 A8MUI8 341 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 MKRN2OSH3BPM6 223 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 FCHO1O14526 889 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 EMC8O43402 210 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 ABCB1P08183 1280 aaPredicted RBP13.02□□□□□ -0.33
CTSS-202ENST00000448301 CAPN3P20807 821 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 EMDP50402 254 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 PRR5P85299 388 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 KLF10Q13118 480 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 RAPSNQ13702 412 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 MAPKAPK3Q16644 382 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 MEP1AQ16819 746 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 AGAP7PQ5VUJ5 663 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 GK5Q6ZS86 529 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 RPS19BP1Q86WX3 136 aaKnown RBP13.02□□□□□ -0.33
CTSS-202ENST00000448301 ANKS4BQ8N8V4 417 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 C17orf47Q8NEP4 570 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 VPS33AQ96AX1 596 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 FAM120BQ96EK7 910 aaKnown RBP13.02□□□□□ -0.33
CTSS-202ENST00000448301 ZNF354BQ96LW1 612 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 AGAP4Q96P64 663 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 SMAD5Q99717 465 aaKnown RBP13.02□□□□□ -0.33
CTSS-202ENST00000448301 NPAS2Q99743 824 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 SLC25A23Q9BV35 468 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 TRIM4Q9C037 500 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 WWTR1Q9GZV5 400 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 ANKRA2Q9H9E1 313 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 SERHLQ9NQF3 203 aa13.02□□□□□ -0.33
CTSS-202ENST00000448301 HEMK1Q9Y5R4 338 aaPredicted RBP13.02□□□□□ -0.33
CTSS-202ENST00000448301 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 C2orf92A0A1B0GVN3 265 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 A0A1W2PP18 115 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 CPSF4O95639 269 aaKnown RBP13.01□□□□□ -0.33
CTSS-202ENST00000448301 ALPPP05187 535 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 MLF1P58340 268 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 TLR1Q15399 786 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 MAPRE2Q15555 327 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 B3GNTL1Q67FW5 361 aaPredicted RBP13.01□□□□□ -0.33
CTSS-202ENST00000448301 TCTN3Q6NUS6 607 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 ISLR2Q6UXK2 745 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 MTDHQ86UE4 582 aaKnown RBP13.01□□□□□ -0.33
CTSS-202ENST00000448301 ZNF441Q8N8Z8 693 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 NUP43Q8NFH3 380 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 OR56A1Q8NGH5 318 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 GIMAP5Q96F15 307 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 ITCHQ96J02 903 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 MAGED4Q96JG8 741 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 VSTM2LQ96N03 204 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 MS4A4EQ96PG1 132 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 PANX1Q96RD7 426 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 GAL3ST4Q96RP7 486 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 ARHGAP9Q9BRR9 750 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 CCDC106Q9BWC9 280 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 MYLK2Q9H1R3 596 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 ADNPQ9H2P0 1102 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 CDCP1Q9H5V8 836 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 FOLH1BQ9HBA9 442 aa13.01□□□□□ -0.33
CTSS-202ENST00000448301 ZCCHC3Q9NUD5 404 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms