RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.37□□□□□ -1.716e-6■□□□□ 10.2
SDCBP-205ENST00000447267 MORC2Q9Y6X9 1032 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-205ENST00000447267 NPIPA5A0A0B4J1W7 369 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 TRBV11-1A0A0K0K1C0 115 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 CDHR4A6H8M9 788 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 HMGB1P1B2RPK0 211 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-205ENST00000447267 NPIPA7E9PJI5 369 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 PRPF4O43172 522 aaKnown RBP eCLIP4.36□□□□□ -1.71
SDCBP-205ENST00000447267 SRPX2O60687 465 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-205ENST00000447267 TRAPPC6AO75865 159 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 OPN1MWP04001 364 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 SBK3P0C264 359 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 NPIPA8P0DM63 369 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 OPN1MW2P0DN77 364 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 OPN1MW3P0DN78 364 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 ERVK-10P10266 1014 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 MTHFD2P13995 350 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 PCMT1P22061 227 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 PCK1P35558 622 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 SOX3P41225 446 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 XCR1P46094 333 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 PROK1P58294 105 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 IL10RBQ08334 325 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 BAMBIQ13145 260 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 BOP1Q14137 746 aaKnown RBP4.36□□□□□ -1.71
SDCBP-205ENST00000447267 RCAN2Q14206 197 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 ZSWIM7Q19AV6 140 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 PRTGQ2VWP7 1150 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 SPDYE7PQ495Y7 208 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 CCDC40Q4G0X9 1142 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 OLFML2AQ68BL7 652 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 KCTD11Q693B1 232 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 PDPK2PQ6A1A2 396 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 CLEC17AQ6ZS10 378 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 CDKL3Q8IVW4 592 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-205ENST00000447267 ZNF619Q8N2I2 560 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 SYT14Q8NB59 555 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 NOA1Q8NC60 698 aaKnown RBP4.36□□□□□ -1.71
SDCBP-205ENST00000447267 NFAM1Q8NET5 270 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-205ENST00000447267 OR9A4Q8NGU2 314 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 ZPLD1Q8TCW7 415 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 TFGQ92734 400 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-205ENST00000447267 TEKT5Q96M29 485 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 SERINC2Q96SA4 455 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 UGT2B28Q9BY64 529 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 OR52A5Q9H2C5 316 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 MVB12BQ9H7P6 319 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 MAGEF1Q9HAY2 307 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 NTN4Q9HB63 628 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 TCF7L1Q9HCS4 588 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 NT5MQ9NPB1 228 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 CHCHD3Q9NX63 227 aaKnown RBP4.36□□□□□ -1.71
SDCBP-205ENST00000447267 DNPEPQ9ULA0 475 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 TTC7AQ9ULT0 858 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-205ENST00000447267 ATG4BQ9Y4P1 393 aa4.36□□□□□ -1.71
SDCBP-205ENST00000447267 GOLGA6L10A0A0M3HER8 536 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 TLDC2A0PJX2 215 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 DPRXA6NFQ7 191 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 ERICH4A6NGS2 130 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 H0YGG7 62 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 WWP2O00308 870 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 PMM2O15305 246 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 PIP5K1CO60331 668 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 LRATO95237 230 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 CGAP01215 116 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 SLC35E2P0CK97 266 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 EPB41P11171 864 aaKnown RBP4.35□□□□□ -1.71
SDCBP-205ENST00000447267 CYP4B1P13584 511 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 SHMT2P34897 504 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 RFC1P35251 1148 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-205ENST00000447267 HSPA9P38646 679 aaKnown RBP4.35□□□□□ -1.71
SDCBP-205ENST00000447267 MAGEA8P43361 318 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 FMO5P49326 533 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 PCYT1AP49585 367 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 GSCP56915 257 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-205ENST00000447267 ARF3P61204 181 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-205ENST00000447267 RHAGQ02094 409 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 TNFRSF17Q02223 184 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 BSPH1Q075Z2 132 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 ZNF844Q08AG5 666 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 IFT88Q13099 833 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 GAB1Q13480 694 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 RUNX2Q13950 521 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 DOC2AQ14183 400 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 TRIP10Q15642 601 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 SYTL3Q4VX76 610 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 FAM182AQ5T1J6 154 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 ENPP6Q6UWR7 440 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 RBMS3Q6XE24 437 aaKnown RBP4.35□□□□□ -1.71
SDCBP-205ENST00000447267 ARCQ7LC44 396 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 PRSS41Q7RTY9 318 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 LNX2Q8N448 690 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 IQUBQ8NA54 791 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 OR51Q1Q8NH59 317 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 BRSK1Q8TDC3 778 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 CHAC2Q8WUX2 184 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 ASZ1Q8WWH4 475 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 CENPIQ92674 756 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-205ENST00000447267 TMEM186Q96B77 213 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 DOCK7Q96N67 2140 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms