RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 DDX53Q86TM3 631 aaKnown RBP13.44□□□□□ -0.26
ERCC3-203ENST00000445889 SLC9B2Q86UD5 537 aa13.44□□□□□ -0.26
ERCC3-203ENST00000445889 ZFPM2Q8WW38 1151 aa13.44□□□□□ -0.26
ERCC3-203ENST00000445889 DEDD2Q8WXF8 326 aa13.44□□□□□ -0.26
ERCC3-203ENST00000445889 MGAT4BQ9UQ53 548 aa13.44□□□□□ -0.26
ERCC3-203ENST00000445889 AP1M2Q9Y6Q5 423 aa13.44□□□□□ -0.26
ERCC3-203ENST00000445889 FAM240BA0A1B0GVZ2 78 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 HOXA2O43364 376 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 POP7O75817 140 aaKnown RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 EFEMP2O95967 443 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 CELP19835 753 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ENDOUP21128 410 aaKnown RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 CCT3P49368 545 aaKnown RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF33BQ06732 778 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 BTBD16Q32M84 506 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF791Q3KP31 576 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 LCN1P1Q5VSP4 162 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 RAET1GQ6H3X3 334 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 KIAA1161Q6NSJ0 714 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 IL20RBQ6UXL0 311 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ASB18Q6ZVZ8 466 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ADCK2Q7Z695 626 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 GRPEL2Q8TAA5 225 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 CD99L2Q8TCZ2 262 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 TM4SF18Q96CE8 201 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 EFCAB11Q9BUY7 163 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 GALNT9Q9HCQ5 603 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 MAPRE3Q9UPY8 281 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 SYNDIG1LA6NDD5 238 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 TMPRSS11DO60235 418 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ERAL1O75616 437 aaKnown RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 RAB36O95755 333 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 IL1AP01583 271 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 KCNJ5P48544 419 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 PNLIPRP1P54315 467 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ZDHHC20Q5W0Z9 365 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 KIF18BQ86Y91 864 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF547Q8IVP9 402 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 GHDCQ8N2G8 530 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 GDPD1Q8N9F7 314 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 OR5H6Q8NGV6 325 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 SENP5Q96HI0 755 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 OR51I1Q9H343 314 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 EQTNQ9NQ60 294 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 MCUBQ9NWR8 336 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 TEKT2Q9UIF3 430 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 HSPB11Q9Y547 144 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 KCNE3Q9Y6H6 103 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF106Q9H2Y7 1883 aaKnown RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 C12orf71A8MTZ7 269 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 FOXE1O00358 373 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 SCAMP1O15126 338 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 PDPK1O15530 556 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF780AO75290 641 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 LRG1P02750 347 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ALPPP05187 535 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 MAP2K3P46734 347 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 TCEA2Q15560 299 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 MPP7Q5T2T1 576 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 TCEAL8Q8IYN2 117 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 TRIM63Q969Q1 353 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 UPRTQ96BW1 309 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 CXorf40BQ96DE9 158 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 CLIP3Q96DZ5 547 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 METTL2AQ96IZ6 378 aaKnown RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 MSLNLQ96KJ4 702 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF354BQ96LW1 612 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 RIPOR3Q96MK2 946 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 C19orf43Q9BQ61 176 aa13.43□□□□□ -0.26
ERCC3-203ENST00000445889 TRIM45Q9H8W5 580 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 SIRT3Q9NTG7 399 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-203ENST00000445889 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 FAAHO00519 579 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 MMP20O60882 483 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 EPPINO95925 133 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 NR2F6P10588 404 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF30P17039 623 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 SYN1P17600 705 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 ALAS2P22557 587 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 IRS1P35568 1242 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 P2RX3P56373 397 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 ZNF57Q68EA5 555 aaPredicted RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 SLC30A6Q6NXT4 461 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 ELMOD2Q8IZ81 293 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 CPXM2Q8N436 756 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 DOK4Q8TEW6 326 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 PCNPQ8WW12 178 aaKnown RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 NACC2Q96BF6 587 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 TBX5Q99593 518 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 SCN5AQ14524 2016 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 ZSCAN5BA6NJL1 495 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 FAM183AA6NL82 134 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 ISM1B1AKI9 464 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 LATO43561 262 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 SLC2A10O95528 541 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 DDX5P17844 614 aaKnown RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 POLR2EP19388 210 aaKnown RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 DDCP20711 480 aa13.42□□□□□ -0.26
ERCC3-203ENST00000445889 MLLT3P42568 568 aaPredicted RBP13.42□□□□□ -0.26
ERCC3-203ENST00000445889 SLC6A11P48066 632 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms