RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 TMEM64Q6YI46 380 aa16.21■□□□□ 0.18
SGCE-206ENST00000445866 LRRC69Q6ZNQ3 347 aa16.21■□□□□ 0.18
SGCE-206ENST00000445866 SPACA3Q8IXA5 215 aa16.21■□□□□ 0.18
SGCE-206ENST00000445866 THAP4Q8WY91 577 aa16.21■□□□□ 0.18
SGCE-206ENST00000445866 MOAP1Q96BY2 351 aa16.21■□□□□ 0.18
SGCE-206ENST00000445866 LRRC58Q96CX6 371 aa16.21■□□□□ 0.18
SGCE-206ENST00000445866 CGREF1Q99674 301 aa16.21■□□□□ 0.18
SGCE-206ENST00000445866 SLC35A5Q9BS91 424 aa16.21■□□□□ 0.18
SGCE-206ENST00000445866 NTMQ9P121 344 aa16.21■□□□□ 0.18
SGCE-206ENST00000445866 RNF103-CHMP3A0A140T963 221 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 A0A1W2PQ72 361 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 MASP2O00187 686 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 NME6O75414 186 aaPredicted RBP16.2■□□□□ 0.18
SGCE-206ENST00000445866 HPP00738 406 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 IGKV3-11P04433 115 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 KRT16P08779 473 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 MXRA7P84157 204 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 GAB1Q13480 694 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 CAPRIN1Q14444 709 aaKnown RBP16.2■□□□□ 0.18
SGCE-206ENST00000445866 TRMT5Q32P41 509 aaKnown RBP16.2■□□□□ 0.18
SGCE-206ENST00000445866 PLAG1Q6DJT9 500 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 RNF111Q6ZNA4 994 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 ZNF615Q8N8J6 731 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 OR56A1Q8NGH5 318 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 M1APQ8TC57 530 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 ROPN1LQ96C74 230 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 AURKBQ96GD4 344 aaPredicted RBP16.2■□□□□ 0.18
SGCE-206ENST00000445866 EQTNQ9NQ60 294 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 SLC25A37Q9NYZ2 338 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 VAPAQ9P0L0 249 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 PPIEQ9UNP9 301 aaKnown RBP16.2■□□□□ 0.18
SGCE-206ENST00000445866 SDK2Q58EX2 2172 aa16.2■□□□□ 0.18
SGCE-206ENST00000445866 CLIC1O00299 241 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 KRT75O95678 551 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 SLC37A1P57057 533 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 BROXQ5VW32 411 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 ANGPTL8Q6UXH0 198 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 HSDL2Q6YN16 418 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 CCDC81Q6ZN84 652 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 MSRB3Q8IXL7 192 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 APCDD1LQ8NCL9 501 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 SFXN5Q8TD22 340 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 VMP1Q96GC9 406 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 C16orf58Q96GQ5 468 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 FER1L6-AS2Q96M78 137 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 SLC39A3Q9BRY0 314 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 THUMPD3Q9BV44 507 aaKnown RBP16.19■□□□□ 0.18
SGCE-206ENST00000445866 TPT1P8Q9HAU6 139 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.19■□□□□ 0.18
SGCE-206ENST00000445866 CACNA1AO00555 2505 aa16.19■□□□□ 0.18
SGCE-206ENST00000445866 PRAMEF2O60811 474 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 COQ9O75208 318 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 C1QCP02747 245 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 HMGN2P05204 90 aaKnown RBP16.18■□□□□ 0.18
SGCE-206ENST00000445866 IFI6P09912 130 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 EMDP50402 254 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 CLCN2P51788 898 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 CASP9P55211 416 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 BNIP1Q12981 228 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 DUSP8Q13202 625 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 CRTC2Q53ET0 693 aaPredicted RBP16.18■□□□□ 0.18
SGCE-206ENST00000445866 RUNDC3AQ59EK9 446 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 CCDC121Q6ZUS5 278 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 C16orf52Q8NHV5 167 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 PNPT1Q8TCS8 783 aaKnown RBP16.18■□□□□ 0.18
SGCE-206ENST00000445866 ZFP90Q8TF47 636 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 HOPXQ9BPY8 73 aaPredicted RBP16.18■□□□□ 0.18
SGCE-206ENST00000445866 YIPF4Q9BSR8 244 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 ATP13A2Q9NQ11 1180 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 PRODH2Q9UF12 536 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 FAF1Q9UNN5 650 aaPredicted RBP16.18■□□□□ 0.18
SGCE-206ENST00000445866 CFL2Q9Y281 166 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 SSUH2Q9Y2M2 353 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 TRBV11-1A0A0K0K1C0 115 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 A8MUI8 341 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 EVPLLA8MZ36 301 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 UNC5CO95185 931 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 CLPSP04118 112 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 SLC25A3Q00325 362 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 DCAF10Q5QP82 559 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 SAXO2Q658L1 398 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 NANOGP8Q6NSW7 305 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 HACD2Q6Y1H2 254 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 SLC29A4Q7RTT9 530 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 KBTBD2Q8IY47 623 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 KIF2BQ8N4N8 673 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 FBXO27Q8NI29 283 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 NEURL3Q96EH8 262 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 ANKRD27Q96NW4 1050 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 DEFB126Q9BYW3 111 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 SEMA4CQ9C0C4 833 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 EPS8L2Q9H6S3 715 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 NANOGQ9H9S0 305 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 MMP25Q9NPA2 562 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 POLHQ9Y253 713 aa16.18■□□□□ 0.18
SGCE-206ENST00000445866 HEMK1Q9Y5R4 338 aaPredicted RBP16.18■□□□□ 0.18
SGCE-206ENST00000445866 OR6C76A6NM76 312 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 ZFAND5O76080 213 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 CELA2AP08217 269 aa16.17■□□□□ 0.18
SGCE-206ENST00000445866 HOXB9P17482 250 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms