RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 PLEKHA3Q9HB20 300 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 S100A14Q9HCY8 104 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 TRPC4Q9UBN4 977 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 OR1A2Q9Y585 309 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 SALL1Q9NSC2 1324 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 RREB1Q92766 1687 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 RTL9Q8NET4 1388 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 PHLPP1O60346 1717 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 TIAM2Q8IVF5 1701 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 DDX60Q8IY21 1712 aaKnown RBP3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 NWD2Q9ULI1 1742 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 BCORQ6W2J9 1755 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 ERICH2A1L162 156 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 RTN2O75298 545 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 OR6B1O95007 311 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 STBD1O95210 358 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 YEATS4O95619 227 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 SBK2P0C263 348 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 CD1DP15813 335 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF10P21506 573 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 CAPGP40121 348 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 TNFSF10P50591 281 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 UCP2P55851 309 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 HAND2P61296 217 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 TPM4P67936 248 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 RBBP4Q09028 425 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 GK2Q14410 553 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 STK38Q15208 465 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 RPS6KA1Q15418 735 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 SNRNP48Q6IEG0 339 aaKnown RBP3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 FAM173BQ6P4H8 233 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 RBM43Q6ZSC3 357 aaKnown RBP3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 LPCAT1Q8NF37 534 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 NPRL2Q8WTW4 380 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 PIBF1Q8WXW3 757 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 HAS2Q92819 552 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 DDX50Q9BQ39 737 aaKnown RBP3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 MRPL9Q9BYD2 267 aaKnown RBP3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 TRIM7Q9C029 511 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 KRT23Q9C075 422 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 NAT10Q9H0A0 1025 aaKnown RBP3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 NAPBQ9H115 298 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 RNF41Q9H4P4 317 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 AKIRIN1Q9H9L7 192 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 WDR41Q9HAD4 459 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 MED17Q9NVC6 651 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 DNAJC11Q9NVH1 559 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 ANO10Q9NW15 660 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 PLEK2Q9NYT0 353 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 FBXW2Q9UKT8 454 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 ERVK-19Q9WJR5 959 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 DOCK2Q92608 1830 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 UBN2Q6ZU65 1347 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF532Q9HCE3 1301 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 C4AP0C0L4 1744 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 C4BP0C0L5 1744 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 CHD4Q14839 1912 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 AKAP11Q9UKA4 1901 aa3.64□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF831Q5JPB2 1677 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 OR5H15A6NDH6 313 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 CCDC69A6NI79 296 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 SLC15A5A6NIM6 579 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 CACNB4O00305 520 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 PSMD3O43242 534 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 NEMFO60524 1076 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 CTDNEP1O95476 244 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 CHRNGP07510 517 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 ANPEPP15144 967 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 GATA1P15976 413 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 CYP3A5P20815 502 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 GPX3P22352 226 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 GATA2P23769 480 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 OXTRP30559 389 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 TDO2P48775 406 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 SMSP52788 366 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 MS4A2Q01362 244 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 MSLNQ13421 630 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 GIT2Q14161 759 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 MEF2DQ14814 521 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 SIX1Q15475 284 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 ALX1Q15699 326 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 CAMK4Q16566 473 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 RFTN2Q52LD8 501 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 EPC2Q52LR7 807 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 SLC10A5Q5PT55 438 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 CDHR3Q6ZTQ4 885 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 MTERF4Q7Z6M4 381 aaKnown RBP3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 RPAINQ86UA6 219 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 WDR49Q8IV35 697 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 CCDC197Q8NCU1 140 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 OR6F1Q8NGZ6 308 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 GANCQ8TET4 914 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 UBTD2Q8WUN7 234 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 C5orf30Q96GV9 206 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 PCED1BQ96HM7 432 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF597Q96LX8 424 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 TAAR6Q96RI8 345 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 TNFRSF13CQ96RJ3 184 aa3.63□□□□□ -1.83
HMGB3P6-201ENST00000444896 TSPYL1Q9H0U9 437 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms