RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 NME2P22392 152 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 CLNS1AP54105 237 aaKnown RBP11.35□□□□□ -0.59
LTBR-204ENST00000444814 MANFP55145 182 aaKnown RBP11.35□□□□□ -0.59
LTBR-204ENST00000444814 MLLT10P55197 1068 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 FOXK1P85037 733 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 EBPQ15125 230 aaKnown RBP11.35□□□□□ -0.59
LTBR-204ENST00000444814 LSM12Q3MHD2 195 aaKnown RBP11.35□□□□□ -0.59
LTBR-204ENST00000444814 VPS26BQ4G0F5 336 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 CPTPQ5TA50 214 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 RGS9BPQ6ZS82 235 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 GK5Q6ZS86 529 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 SPATA19Q7Z5L4 167 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 C9orf40Q8IXQ3 194 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 LIX1Q8N485 282 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 Q8NA96 180 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 CEP70Q8NHQ1 597 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.35□□□□□ -0.59
LTBR-204ENST00000444814 PIWIL2Q8TC59 973 aaKnown RBP11.35□□□□□ -0.59
LTBR-204ENST00000444814 FAR1Q8WVX9 515 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 SNRNP40Q96DI7 357 aaKnown RBP11.35□□□□□ -0.59
LTBR-204ENST00000444814 SCMH1Q96GD3 660 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 ZNF681Q96N22 645 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 SORT1Q99523 831 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 MEAF6Q9HAF1 191 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 HHATLQ9HCP6 504 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 SACM1LQ9NTJ5 587 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 DDX18Q9NVP1 670 aaKnown RBP11.35□□□□□ -0.59
LTBR-204ENST00000444814 ANKRD10Q9NXR5 420 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 CNIH4Q9P003 139 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 TMCC3Q9ULS5 477 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 PTGDR2Q9Y5Y4 395 aa11.35□□□□□ -0.59
LTBR-204ENST00000444814 MED13Q9UHV7 2174 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 WASHC1A8K0Z3 465 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 AKAP10O43572 662 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 SNNO75324 88 aaPredicted RBP11.34□□□□□ -0.59
LTBR-204ENST00000444814 WISP1O95388 367 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 EDN3P14138 238 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 SSTR4P31391 388 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 PRR5P85299 388 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 ALDH6A1Q02252 535 aaKnown RBP11.34□□□□□ -0.59
LTBR-204ENST00000444814 KCNC4Q03721 635 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 RPS6KA2Q15349 733 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 DPY19L1Q2PZI1 675 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.34□□□□□ -0.59
LTBR-204ENST00000444814 SPINK14Q6IE38 97 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 BHLHB9Q6PI77 547 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 PAOXQ6QHF9 649 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 IL20RBQ6UXL0 311 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 OR9A2Q8NGT5 310 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 ZNF75CPQ92670 426 aaPredicted RBP11.34□□□□□ -0.59
LTBR-204ENST00000444814 MIB2Q96AX9 1013 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 CTHRC1Q96CG8 243 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 SPACA9Q96E40 222 aaPredicted RBP11.34□□□□□ -0.59
LTBR-204ENST00000444814 SECISBP2Q96T21 854 aaKnown RBP11.34□□□□□ -0.59
LTBR-204ENST00000444814 ZBTB18Q99592 522 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 NPAS2Q99743 824 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 NUF2Q9BZD4 464 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 DPY30Q9C005 99 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 MED4Q9NPJ6 270 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 KLHL1Q9NR64 748 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 ATP6V1HQ9UI12 483 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 PCDHGB4Q9UN71 923 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 CSAG2Q9Y5P2 127 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 ITPR1Q14643 2758 aa11.34□□□□□ -0.59
LTBR-204ENST00000444814 PLOD2O00469 737 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 SCAMP2O15127 329 aaKnown RBP11.33□□□□□ -0.6
LTBR-204ENST00000444814 NEURL1O76050 574 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 LRATO95237 230 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 JUNP05412 331 aaKnown RBP11.33□□□□□ -0.6
LTBR-204ENST00000444814 KRT16P08779 473 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 DRD5P21918 477 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 SOX3P41225 446 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 PPICP45877 212 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 NR0B1P51843 470 aaKnown RBP11.33□□□□□ -0.6
LTBR-204ENST00000444814 PSMD4P55036 377 aaKnown RBP11.33□□□□□ -0.6
LTBR-204ENST00000444814 CASP6P55212 293 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 IRX1P78414 480 aaPredicted RBP11.33□□□□□ -0.6
LTBR-204ENST00000444814 LRRC74AQ0VAA2 488 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 KRTCAP3Q53RY4 240 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 TTMPQ5BVD1 217 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 ZNF628Q5EBL2 1059 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 SLC22A10Q63ZE4 541 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 BNC2Q6ZN30 1099 aaPredicted RBP11.33□□□□□ -0.6
LTBR-204ENST00000444814 ACAD11Q709F0 780 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 GALNTL5Q7Z4T8 443 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 MMP21Q8N119 569 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 ZNF321PQ8N8H1 164 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 ZNF615Q8N8J6 731 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 PSD4Q8NDX1 1056 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 ADCY4Q8NFM4 1077 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 OR52R1Q8NGF1 315 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 C16orf52Q8NHV5 167 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 GRHL3Q8TE85 626 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 UCN3Q969E3 161 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 GFM2Q969S9 779 aaKnown RBP11.33□□□□□ -0.6
LTBR-204ENST00000444814 MOAP1Q96BY2 351 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 LCORQ96JN0 433 aaPredicted RBP11.33□□□□□ -0.6
LTBR-204ENST00000444814 C7orf26Q96N11 449 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 SIGLEC12Q96PQ1 595 aa11.33□□□□□ -0.6
LTBR-204ENST00000444814 FAM173AQ9BQD7 235 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms