RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TTKP33981 857 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 UGT2B15P54855 530 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 CSNK2BP67870 215 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 OLR1P78380 273 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 C16orf72Q14CZ0 275 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 GALNT12Q8IXK2 581 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 OFCC1Q8IZS5 231 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 OR10Q1Q8NGQ4 319 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 OR9A4Q8NGU2 314 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 MMABQ96EY8 250 aaPredicted RBP5.66□□□□□ -1.5
VPS50-205ENST00000441602 C7orf34Q96L11 122 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 ART5Q96L15 291 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 ZNF285Q96NJ3 590 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 STACQ99469 402 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 FNDC11Q9BVV2 318 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 YIPF2Q9BWQ6 316 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 PIGUQ9H490 435 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 MTHFD2LQ9H903 347 aaPredicted RBP5.66□□□□□ -1.5
VPS50-205ENST00000441602 FAM118AQ9NWS6 357 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 MGAT4BQ9UQ53 548 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 CFL2Q9Y281 166 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 SLCO1B1Q9Y6L6 691 aa5.66□□□□□ -1.5
VPS50-205ENST00000441602 HEATR5BQ9P2D3 2071 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 A0A0A6YYC8 382 aaPredicted RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 ARRDC5A6NEK1 342 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 A6NHS1 94 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 I3L1I5 382 aaPredicted RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 ZNF749O43361 778 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 JRKO75564 520 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 EEF1B2P24534 225 aaKnown RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 XCR1P46094 333 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 HSD17B7P56937 341 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 POU6F2P78424 691 aaPredicted RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 DAB2P98082 770 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 KCNAB2Q13303 367 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 KEAP1Q14145 624 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 GPR19Q15760 415 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 ZNF311Q5JNZ3 666 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 FGD3Q5JSP0 725 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 COLEC12Q5KU26 742 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 DCST1Q5T197 706 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 FAM180BQ6P0A1 224 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 DHRS4L2Q6PKH6 230 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 DEF8Q6ZN54 512 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 RRM2BQ7LG56 351 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 SLC35F3Q8IY50 421 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 OR2L13Q8N349 312 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 SMYD1Q8NB12 490 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 HDAC2Q92769 488 aaKnown RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 TREX2Q9BQ50 279 aaPredicted RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 YIPF4Q9BSR8 244 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 FAM60AQ9NP50 221 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 PAPOLBQ9NRJ5 636 aaKnown RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 DUSP22Q9NRW4 184 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 CUTCQ9NTM9 273 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 UCKL1Q9NWZ5 548 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 NDUFAF4Q9P032 175 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 HCN3Q9P1Z3 774 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 PRODH2Q9UF12 536 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 TPRKBQ9Y3C4 175 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 HCN4Q9Y3Q4 1203 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 WDR45Q9Y484 360 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 FANCMQ8IYD8 2048 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 PLXND1Q9Y4D7 1925 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 MN1Q10571 1320 aaPredicted RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 LOC100130705A0A1B0GUX0 176 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 SLC16A6O15403 523 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 IFNA16P05015 189 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 CCNYL3P0C7X3 344 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 CD247P20963 164 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 OR1D5P58170 312 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 PPP1CAP62136 330 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 IL5RAQ01344 420 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 NR1D2Q14995 579 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 SYPL1Q16563 259 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 PLK5Q496M5 336 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 RPS26P11Q5JNZ5 115 aaPredicted RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 CWF19L1Q69YN2 538 aaKnown RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 WDR74Q6RFH5 385 aaPredicted RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 C1orf210Q8IVY1 113 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 SFTPA2Q8IWL1 248 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 VWA5B2Q8N398 1253 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 Q8N9G6 341 aaPredicted RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 TOR1AIP2Q8NFQ8 470 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 KLHL6Q8WZ60 621 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 CSF3RQ99062 836 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 TEX12Q9BXU0 123 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 POLR2J2Q9GZM3 115 aaKnown RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 POLR2J3Q9H1A7 115 aaKnown RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 CCNB1IP1Q9NPC3 277 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 UBAP1Q9NZ09 502 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 MRTO4Q9UKD2 239 aaKnown RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 SLC6A14Q9UN76 642 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 SATB2Q9UPW6 733 aa5.65□□□□□ -1.5
VPS50-205ENST00000441602 MRPS2Q9Y399 296 aaKnown RBP5.65□□□□□ -1.5
VPS50-205ENST00000441602 FITM1A5D6W6 292 aa5.65□□□□□ -1.51
VPS50-205ENST00000441602 CYR61O00622 381 aa5.65□□□□□ -1.51
VPS50-205ENST00000441602 FGF17O60258 216 aa5.65□□□□□ -1.51
VPS50-205ENST00000441602 PRAMEF10O60809 474 aa5.65□□□□□ -1.51
VPS50-205ENST00000441602 PRAMEF2O60811 474 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms