RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 PIGVQ9NUD9 493 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 ACSL6Q9UKU0 697 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 NME7Q9Y5B8 376 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 SHOXO15266 292 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 ITM2AO43736 263 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 USP2O75604 605 aaPredicted RBP6.39□□□□□ -1.39
USP46-201ENST00000441222 SC5DO75845 299 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 THEGLP0DJG4 465 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 ETFAP13804 333 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 AK4P27144 223 aaPredicted RBP6.39□□□□□ -1.39
USP46-201ENST00000441222 PLCXD2Q0VAA5 305 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 TCTE1Q5JU00 501 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 NANOGP8Q6NSW7 305 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 GDPGP1Q6ZNW5 385 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 TSPYL5Q86VY4 417 aaPredicted RBP6.39□□□□□ -1.39
USP46-201ENST00000441222 TMEM173Q86WV6 379 aaPredicted RBP6.39□□□□□ -1.39
USP46-201ENST00000441222 ZFAND4Q86XD8 727 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 RSC1A1Q92681 617 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 ABCG5Q9H222 651 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 OR51B5Q9H339 312 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 NANOGQ9H9S0 305 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 GKN1Q9NS71 199 aa6.39□□□□□ -1.39
USP46-201ENST00000441222 A8MVJ9 347 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 TSTD3H0UI37 97 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 ADAMTS4O75173 837 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 GSRP00390 522 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 OR12D1P0DN82 309 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 PORP16435 677 aaPredicted RBP6.38□□□□□ -1.39
USP46-201ENST00000441222 ZNF43P17038 809 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 CD34P28906 385 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 ALDH3B1P43353 468 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 LSSP48449 732 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 HNRNPKP61978 463 aaKnown RBP eCLIP6.38□□□□□ -1.39
USP46-201ENST00000441222 MEP1AQ16819 746 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 LRIT3Q3SXY7 679 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 C6orf183Q5T699 404 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 OR52E8Q6IFG1 317 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 SPATC1Q76KD6 591 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 TRMT10AQ8TBZ6 339 aaKnown RBP6.38□□□□□ -1.39
USP46-201ENST00000441222 STK35Q8TDR2 534 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 CAPNS2Q96L46 248 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 TWNKQ96RR1 684 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 RNF11Q9Y3C5 154 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 HS3ST4Q9Y661 456 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 OR51F1A6NGY5 319 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 PRAMEF11O60813 436 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 NUDT7P0C024 238 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 MSX1P28360 303 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 CRABP1P29762 137 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 ZNF136P52737 540 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 OR4D2P58180 307 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 CYP27C1Q4G0S4 372 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 TERB2Q8NHR7 220 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 TMEM246Q9BRR3 403 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 BIN3Q9NQY0 253 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 REV1Q9UBZ9 1251 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 RPH3AQ9Y2J0 694 aaPredicted RBP6.38□□□□□ -1.39
USP46-201ENST00000441222 CFAP20Q9Y6A4 193 aaKnown RBP6.38□□□□□ -1.39
USP46-201ENST00000441222 PLIN4Q96Q06 1357 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 A0A0U1RQF3 1178 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 A6NIZ1 184 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 UBFD1O14562 309 aaKnown RBP6.38□□□□□ -1.39
USP46-201ENST00000441222 PRAF2O60831 178 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 BMP4P12644 408 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 TYRP1P17643 537 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 MTNR1AP48039 350 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 VSX2P58304 361 aaPredicted RBP6.38□□□□□ -1.39
USP46-201ENST00000441222 RAP1BP61224 184 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 RAP1AP62834 184 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 TGFBR3Q03167 851 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 RING1Q06587 406 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 ELAVL3Q14576 367 aaKnown RBP6.38□□□□□ -1.39
USP46-201ENST00000441222 CCDC58Q4VC31 144 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 C6orf141Q5SZD1 244 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 HACD2Q6Y1H2 254 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 Q8N9G6 341 aaPredicted RBP6.38□□□□□ -1.39
USP46-201ENST00000441222 TBC1D20Q96BZ9 403 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 LGALS12Q96DT0 336 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 MGLLQ99685 303 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 PCDHAC2Q9Y5I4 1007 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 AP1M2Q9Y6Q5 423 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 LOC102725191A0A1B0GVB3 256 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 AIPO00170 330 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 PTHP01270 115 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 FCER2P06734 321 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 RPL23AP62750 156 aaKnown RBP6.38□□□□□ -1.39
USP46-201ENST00000441222 PCBP2Q15366 365 aaKnown RBP eCLIP6.38□□□□□ -1.392e-6■■■■■ 40.3
USP46-201ENST00000441222 COQ5Q5HYK3 327 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 CLVS2Q5SYC1 327 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 FAM205BPQ63HN1 556 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 GALNT10Q86SR1 603 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 ZNF695Q8IW36 515 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 ZNF461Q8TAF7 563 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 FOXJ1Q92949 421 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 WDR92Q96MX6 357 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 TEPSINQ96N21 525 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 CCM2LQ9NUG4 571 aaPredicted RBP6.38□□□□□ -1.39
USP46-201ENST00000441222 TMEM45AQ9NWC5 275 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 IL20RAQ9UHF4 553 aa6.38□□□□□ -1.39
USP46-201ENST00000441222 SARDHQ9UL12 918 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms