RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SIGLEC5O15389 551 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 SCO2O43819 266 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 GRAP2O75791 330 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 LETM1O95202 739 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC25A27O95847 323 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 CPA3P15088 417 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 HOXB8P17481 243 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 GATA2P23769 480 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 GIFP27352 417 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 SHC1P29353 583 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 HNF4AP41235 474 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 IER3P46695 156 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 STX1BP61266 288 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 IRX4P78413 519 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 CYCSP99999 105 aaKnown RBP2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 ACKR1Q16570 336 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 GLIPR1L2Q4G1C9 344 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 IFI44LQ53G44 452 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 SPANXN4Q5MJ08 99 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 PRAMEF8Q5VWM4 474 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 DOK6Q6PKX4 331 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 ASPGQ86U10 573 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 LRRTM1Q86UE6 522 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 KLHDC8AQ8IYD2 350 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 THEM5Q8N1Q8 247 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 TEX26Q8N6G2 289 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 CCDC185Q8N715 623 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 OR13C5Q8NGS8 318 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 ST7LQ8TDW4 575 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 SMPDL3AQ92484 453 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 CASP10Q92851 521 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 PTP4A1Q93096 173 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 FAM46BQ96A09 425 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 BPIFA2Q96DR5 249 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZNF274Q96GC6 653 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 ATXN7L3BQ96GX2 97 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 RASL10BQ96S79 203 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 PCDHB18PQ96TA0 734 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 UBAC1Q9BSL1 405 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 RPAP3Q9H6T3 665 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 MED20Q9H944 212 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 RPS10P5Q9NQ39 176 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 MRPL17Q9NRX2 175 aaKnown RBP2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 FAM212BQ9NTI7 297 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 HOXC10Q9NYD6 342 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 NLGN3Q9NZ94 848 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 SH3GLB1Q9Y371 365 aa2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 SPTAN1Q13813 2472 aaKnown RBP2.74□□□□□ -1.97
HMGB3P12-201ENST00000438745 TENM4Q6N022 2769 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 ITPR3Q14573 2671 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 C2orf92A0A1B0GVN3 265 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 A0A1W2PRV1 198 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 KPNA7A9QM74 516 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 EPM2AB3EWF7 344 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 SRSF10O75494 262 aaKnown RBP2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 TRIM16O95361 564 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 SNAI1O95863 264 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 C4BPBP20851 252 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 UGT1A4P22310 534 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 OAS2P29728 719 aaKnown RBP2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 CA8P35219 290 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 FEN1P39748 380 aaKnown RBP2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 MAGEA9P43362 315 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 GSCP56915 257 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC34A1Q06495 639 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 CNTN1Q12860 1018 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 NFATC2Q13469 925 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 CEACAM7Q14002 265 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 BTG3Q14201 252 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 RPS6KA1Q15418 735 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 MOGAT2Q3SYC2 334 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC39A12Q504Y0 691 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 LYPLAL1Q5VWZ2 237 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 TCEAL6Q6IPX3 200 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 LCLAT1Q6UWP7 414 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 TMEM64Q6YI46 380 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 FRRS1Q6ZNA5 592 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 RFPL4BQ6ZWI9 263 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC22A15Q8IZD6 547 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC43A2Q8N370 569 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 C10orf53Q8N6V4 93 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 DEFB124Q8NES8 71 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 OR52B6Q8NGF0 335 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 GPR148Q8TDV2 347 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC35C1Q96A29 364 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 NSMCE3Q96MG7 304 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 FOXN4Q96NZ1 517 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 EDEM2Q9BV94 578 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 OSBPL8Q9BZF1 889 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 TRIM4Q9C037 500 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 WWTR1Q9GZV5 400 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 MTHFD2LQ9H903 347 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 RNPEPL1Q9HAU8 725 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 IL1RAPL2Q9NP60 686 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 GPR173Q9NS66 373 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC7A10Q9NS82 523 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 HYPKQ9NX55 129 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 PSORS1C1Q9UIG5 152 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 STX8Q9UNK0 236 aa2.73□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZNF510Q9Y2H8 683 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms