RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 LINC00299Q6ZSB3 139 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 NUDT13Q86X67 352 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 SLC22A18ASQ8N1D0 253 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 PARP16Q8N5Y8 322 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 AQP11Q8NBQ7 271 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 OR2A1Q8NGT9 310 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 NEURL3Q96EH8 262 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 OTUB1Q96FW1 271 aaPredicted RBP13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 FOXQ1Q9C009 403 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 ZNF556Q9HAH1 456 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 GPR83Q9NYM4 423 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 HEBP2Q9Y5Z4 205 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 HS3ST3A1Q9Y663 406 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 ENPP4Q9Y6X5 453 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 LOC100506127A0A0U1RQW1 187 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 METTL15A6NJ78 407 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 DYRK3O43781 588 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 AIREO43918 545 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 GRK3P35626 688 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 CCR5P51681 352 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 LIM2P55344 173 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 CSNK1G2P78368 415 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 ELOAQ14241 798 aaKnown RBP13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 RSBN1Q5VWQ0 802 aaPredicted RBP13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 C6orf120Q7Z4R8 191 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 UBE3DQ7Z6J8 389 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 ABI3BPQ7Z7G0 1075 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 TAGAPQ8N103 731 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 IPCEF1Q8WWN9 437 aaPredicted RBP13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 OR5P2Q8WZ92 322 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 TEFMQ96QE5 360 aaKnown RBP13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 SIRT3Q9NTG7 399 aaPredicted RBP13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 WSB2Q9NYS7 404 aaPredicted RBP13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 COLEC10Q9Y6Z7 277 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 GON4LQ3T8J9 2241 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 TRBV23OR9-2A0A075B6M9 112 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 RABIFP47224 123 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 PRDX1Q06830 199 aaKnown RBP13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 FZD5Q13467 585 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 OLIG3Q7RTU3 272 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 OR5D16Q8NGK9 328 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 VANGL1Q8TAA9 524 aaPredicted RBP13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 RGMAQ96B86 450 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 SIGLEC11Q96RL6 698 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 NEUROD4Q9HD90 331 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 C14orf119Q9NWQ9 140 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 IMPAD1Q9NX62 359 aa13.1□□□□□ -0.31
PTCHD3-201ENST00000438700 USP34Q70CQ2 3546 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 FFAR1O14842 300 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 CCNKO75909 580 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 CCNB2O95067 398 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 ALPPL2P10696 532 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 POU1F1P28069 291 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 SSR2P43308 183 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 PCBP4P57723 403 aaKnown RBP13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 HMGN2P46Q86SG4 172 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 ZNF605Q86T29 641 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 GATAD2AQ86YP4 633 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 LACC1Q8IV20 430 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 DNAJC22Q8N4W6 341 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 GUCD1Q96NT3 240 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 BCL7BQ9BQE9 202 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 CDADC1Q9BWV3 514 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 AICDAQ9GZX7 198 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 OR51E2Q9H255 320 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 KIR3DX1Q9H7L2 352 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 SPHK1Q9NYA1 384 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 ZNF226Q9NYT6 803 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 ZNF624Q9P2J8 865 aaPredicted RBP13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 PSORS1C1Q9UIG5 152 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 FBXL21Q9UKT6 434 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 TMA7Q9Y2S6 64 aaKnown RBP13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 HCN4Q9Y3Q4 1203 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 MDC1Q14676 2089 aaKnown RBP13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 KNL1Q8NG31 2342 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 TRBV4-1A0A0J9YWV2 114 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 FAM170BA6NMN3 283 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 HMGN4O00479 90 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 SEMA7AO75326 666 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 GASTP01350 101 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 RHCEP18577 417 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 PEBP1P30086 187 aaKnown RBP13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 CTSKP43235 329 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 LIMS1P48059 325 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 NDUFAF5Q5TEU4 345 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 ZNF793Q6ZN11 406 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 NRROSQ86YC3 692 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 RBM45Q8IUH3 476 aaKnown RBP13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 GPR32P1Q8NGA4 272 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 GGHQ92820 318 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 ZBED6CLQ96FA7 236 aaPredicted RBP13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 Q96MT0 163 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 WFDC6Q9BQY6 131 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 SERHL2Q9H4I8 314 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 KLHL31Q9H511 634 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 NMNAT1Q9HAN9 279 aaPredicted RBP13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 PCOLCE2Q9UKZ9 415 aa13.09□□□□□ -0.31
PTCHD3-201ENST00000438700 MRPS17Q9Y2R5 130 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms