RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 NEIL3Q8TAT5 605 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 FBF1Q8TES7 1133 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 KCTD4Q8WVF5 259 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 NINJ1Q92982 152 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 NXNL1Q96CM4 212 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 DTNBP1Q96EV8 351 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 RILPQ96NA2 401 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 ATOH8Q96SQ7 321 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 SERPINI1Q99574 410 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 METTL7AQ9H8H3 244 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 IPPKQ9H8X2 491 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 ACKR4Q9NPB9 350 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 IGSF5Q9NSI5 407 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 AHSPQ9NZD4 102 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 SPRR3Q9UBC9 169 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 CAMK2AQ9UQM7 478 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 L3MBTL1Q9Y468 752 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 PCDHGB3Q9Y5G1 929 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 CHCHD2Q9Y6H1 151 aaPredicted RBP7.13□□□□□ -1.27
VPS50-204ENST00000438395 IKBKGQ9Y6K9 419 aa7.13□□□□□ -1.27
VPS50-204ENST00000438395 A0A096LPK6 155 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 A0A0A6YYD5 115 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 AHRRA9YTQ3 701 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 H0YIV9 168 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 HRKO00198 91 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 PROM1O43490 865 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 ZNF354AO60765 605 aaPredicted RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 DIAPH2O60879 1101 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 SMIM24O75264 130 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 EEDO75530 441 aaKnown RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 PRKRAO75569 313 aaKnown RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 CTAG2O75638 210 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 FAM155BO75949 473 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 SEMA3DO95025 777 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 CLDN9O95484 217 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 RFPL3SP0C7P2 107 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 CD99P14209 185 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 TYK2P29597 1187 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 CASQ1P31415 396 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 GALNSP34059 522 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 CCNG1P51959 295 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 MAPK12P53778 367 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 SLC37A1P57057 533 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 GPX6P59796 221 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 PCDH1Q08174 1060 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 E2F2Q14209 437 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 ACAP2Q15057 778 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 NTRK2Q16620 822 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 ACSF3Q4G176 576 aaPredicted RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 FLYWCH1Q4VC44 716 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 MROH9Q5TGP6 573 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 RTL6Q6ICC9 239 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 METTL2BQ6P1Q9 378 aaKnown RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 TMEM64Q6YI46 380 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 GOLGA7Q7Z5G4 137 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 RNF175Q8N4F7 328 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 OR4K14Q8NGD5 310 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 DOK4Q8TEW6 326 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 FAM222BQ8WU58 562 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 RNASE6Q93091 150 aaKnown RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 TP53INP1Q96A56 240 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 SECISBP2Q96T21 854 aaKnown RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 GPATCH1Q9BRR8 931 aaKnown RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 VPS11Q9H270 941 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 ELOVL6Q9H5J4 265 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 DDX31Q9H8H2 851 aaKnown RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 CXorf21Q9HAI6 301 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 PFDN4Q9NQP4 134 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 TEX10Q9NXF1 929 aaPredicted RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 GRHL1Q9NZI5 618 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 CRIM1Q9NZV1 1036 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 FOXD3Q9UJU5 478 aaPredicted RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 CNOT11Q9UKZ1 510 aaKnown RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 TMCO1Q9UM00 188 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 TRIM33Q9UPN9 1127 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 CFL2Q9Y281 166 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 TSC22D4Q9Y3Q8 395 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 ACANP16112 2415 aa7.12□□□□□ -1.27
VPS50-204ENST00000438395 FLNAP21333 2647 aaKnown RBP7.12□□□□□ -1.27
VPS50-204ENST00000438395 A0A1W2PR48 441 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 ANKRD33BA6NCL7 494 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 TUBAL3A6NHL2 446 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 FOXE1O00358 373 aaPredicted RBP7.11□□□□□ -1.27
VPS50-204ENST00000438395 TMPRSS11DO60235 418 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 GHRHP01286 108 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 GBAP04062 536 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 C2P06681 752 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 INHBAP08476 426 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 ENDOUP21128 410 aaKnown RBP7.11□□□□□ -1.27
VPS50-204ENST00000438395 SSTR4P31391 388 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 BSGP35613 385 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 CPA2P48052 419 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 CDK9P50750 372 aaKnown RBP7.11□□□□□ -1.27
VPS50-204ENST00000438395 XKP51811 444 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 NEK2P51955 445 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 IST1P53990 364 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 DLX5P56178 289 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 FBXW4P57775 412 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 IRF9Q00978 393 aa7.11□□□□□ -1.27
VPS50-204ENST00000438395 PLCXD2Q0VAA5 305 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms