RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 UBL4AP11441 157 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 CLCN2P51788 898 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 ECH1Q13011 328 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 EFR3AQ14156 821 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 DKK3Q9UBP4 350 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 SH3D21A4FU49 640 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 AK4P27144 223 aaPredicted RBP15.11■□□□□ 0.01
PTPN13-204ENST00000436978 TM4SF4P48230 202 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 TMEM69Q5SWH9 247 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 AMIGO3Q86WK7 504 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 NPWQ8N729 165 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 SPTSSAQ969W0 71 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 FBXL20Q96IG2 436 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 SH2B3Q9UQQ2 575 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 MIA3Q5JRA6 1907 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 SDHDO14521 159 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 ATG12O94817 140 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 DIO3P55073 304 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 CRTC1Q6UUV9 634 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 HAVCR2Q8TDQ0 301 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 MMP27Q9H306 513 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 CCDC86Q9H6F5 360 aaKnown RBP15.11■□□□□ 0.01
PTPN13-204ENST00000436978 PNMTP11086 282 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 THBS2P35442 1172 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 HNRNPA0Q13151 305 aaKnown RBP15.11■□□□□ 0.01
PTPN13-204ENST00000436978 FGL2Q14314 439 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 NDUFAF5Q5TEU4 345 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 HTR3DQ70Z44 454 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 C13orf42A0A1B0GVH6 325 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 GGT5P36269 586 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 SHC2P98077 582 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 GRB7Q14451 532 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 SCML4Q8N228 414 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 PAK1IP1Q9NWT1 392 aaPredicted RBP15.11■□□□□ 0.01
PTPN13-204ENST00000436978 NFS1Q9Y697 457 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 POLR1CO15160 346 aaPredicted RBP15.11■□□□□ 0.01
PTPN13-204ENST00000436978 JRKO75564 520 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 GCGRP47871 477 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 ABHD17BQ5VST6 288 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 WACQ9BTA9 647 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 ZNF395Q9H8N7 513 aaPredicted RBP15.11■□□□□ 0.01
PTPN13-204ENST00000436978 PDLIM7Q9NR12 457 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 ICKQ9UPZ9 632 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 LCN1P31025 176 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 GNMTQ14749 295 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 ZNF619Q8N2I2 560 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 LAMB2P55268 1798 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 KIR2DS5A0A0G2JLQ3 304 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 A0A0G2JNG1 304 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 KIR2DS3K7RE56 304 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 IFNGR1P15260 489 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 HTR3AP46098 478 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 MLLT10P55197 1068 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 CRYZQ08257 329 aaKnown RBP15.1■□□□□ 0.01
PTPN13-204ENST00000436978 KIR2DS5Q14953 304 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 RAB11FIP2Q7L804 512 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 SPRYD4Q8WW59 207 aaPredicted RBP15.1■□□□□ 0.01
PTPN13-204ENST00000436978 DIO2Q92813 273 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 ECHDC3Q96DC8 303 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 DMRTB1Q96MA1 342 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 CASD1Q96PB1 797 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 LPAR4Q99677 370 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 KCNN3Q9UGI6 736 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 HTRA2O43464 458 aaPredicted RBP15.1■□□□□ 0.01
PTPN13-204ENST00000436978 MZT1Q08AG7 82 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 MLC1Q15049 377 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 FAM76BQ5HYJ3 339 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 UEVLDQ8IX04 471 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 SEC14L1Q92503 715 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 ENAMQ9NRM1 1142 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 ZNF28P17035 718 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 CEBPBP17676 345 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 ZNF181Q2M3W8 571 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 ALG10BQ5I7T1 473 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 XPNPEP2O43895 674 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 MMP2P08253 660 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 SLC37A3Q8NCC5 494 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 K7ERQ8 282 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 SOCS2O14508 198 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 PABPC4LP0CB38 370 aaKnown RBP15.1■□□□□ 0.01
PTPN13-204ENST00000436978 WDR5P61964 334 aaKnown RBP15.1■□□□□ 0.01
PTPN13-204ENST00000436978 BEND4Q6ZU67 534 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 PITX2Q99697 317 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 STUB1Q9UNE7 303 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 NUP205Q92621 2012 aa15.1■□□□□ 0.01
PTPN13-204ENST00000436978 ANHXE9PGG2 379 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 TNFRSF4P43489 277 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 MARCH4Q9P2E8 410 aaPredicted RBP15.09■□□□□ 0.01
PTPN13-204ENST00000436978 PCTPQ9UKL6 214 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 TRBV2A0A0J9YWF9 115 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 SLC9A3P48764 834 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 DAP3P51398 398 aaKnown RBP15.09■□□□□ 0.01
PTPN13-204ENST00000436978 Q6ZSR6 202 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 DENND6BQ8NEG7 585 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 SCGB1C1Q8TD33 95 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 ZSCAN5BA6NJL1 495 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 ZNF806P0C7X5 589 aa15.09■□□□□ 0.01
PTPN13-204ENST00000436978 CST5P28325 142 aaPredicted RBP15.09■□□□□ 0.01
PTPN13-204ENST00000436978 AFF1P51825 1210 aaKnown RBP15.09■□□□□ 0.01
PTPN13-204ENST00000436978 FUBP1Q96AE4 644 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms