RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SEC24DO94855 1032 aaPredicted RBP19.8■□□□□ 0.76
PTPRF-207ENST00000436724 CD1CP29017 333 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 ITGA1P56199 1179 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 TRMT12Q53H54 448 aaKnown RBP19.8■□□□□ 0.76
PTPRF-207ENST00000436724 DHRSXQ8N5I4 330 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 MOAP1Q96BY2 351 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 ZNF285Q96NJ3 590 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 SAMHD1Q9Y3Z3 626 aaKnown RBP19.8■□□□□ 0.76
PTPRF-207ENST00000436724 A0A1B0GTQ1 180 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 DUX1O43812 170 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 CDC123O75794 336 aaPredicted RBP19.8■□□□□ 0.76
PTPRF-207ENST00000436724 MFN2O95140 757 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 RECKO95980 971 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 IFNA14P01570 189 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 CAPGP40121 348 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 RAB38P57729 211 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 ELOAQ14241 798 aaKnown RBP19.8■□□□□ 0.76
PTPRF-207ENST00000436724 SHQ1Q6PI26 577 aaKnown RBP19.8■□□□□ 0.76
PTPRF-207ENST00000436724 KANSL1Q7Z3B3 1105 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 SAMD14Q8IZD0 417 aaPredicted RBP19.8■□□□□ 0.76
PTPRF-207ENST00000436724 OFCC1Q8IZS5 231 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 COL21A1Q96P44 957 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 OR7D2Q96RA2 312 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 NPLQ9BXD5 320 aaPredicted RBP19.8■□□□□ 0.76
PTPRF-207ENST00000436724 SUSD2Q9UGT4 822 aa19.8■□□□□ 0.76
PTPRF-207ENST00000436724 TMEM184BQ9Y519 407 aaPredicted RBP19.8■□□□□ 0.76
PTPRF-207ENST00000436724 OR2W5A6NFC9 320 aa19.79■□□□□ 0.76
PTPRF-207ENST00000436724 J3KTA2 159 aa19.79■□□□□ 0.76
PTPRF-207ENST00000436724 GPR75O95800 540 aa19.79■□□□□ 0.76
PTPRF-207ENST00000436724 ERV3-1Q14264 604 aa19.79■□□□□ 0.76
PTPRF-207ENST00000436724 CCDC74AQ96AQ1 378 aa19.79■□□□□ 0.76
PTPRF-207ENST00000436724 ANKRD9Q96BM1 317 aaPredicted RBP19.79■□□□□ 0.76
PTPRF-207ENST00000436724 PEX11GQ96HA9 241 aa19.79■□□□□ 0.76
PTPRF-207ENST00000436724 TESMINQ9Y4I5 508 aa19.79■□□□□ 0.76
PTPRF-207ENST00000436724 TMEM247A6NEH6 219 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 HS6ST1O60243 411 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 CHRM4P08173 479 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 THRBP10828 461 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 FUT4P22083 530 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 RRM2P31350 389 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 MAN2A2P49641 1150 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 ADARB1P78563 741 aaKnown RBP19.78■□□□□ 0.76
PTPRF-207ENST00000436724 PUM1Q14671 1186 aaKnown RBP eCLIP19.78■□□□□ 0.76
PTPRF-207ENST00000436724 USP51Q70EK9 711 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 PLXDC1Q8IUK5 500 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 ARMC8Q8IUR7 673 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 GPR32P1Q8NGA4 272 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 SAP25Q8TEE9 199 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 CD180Q99467 661 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 NUDT22Q9BRQ3 303 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 AMBRA1Q9C0C7 1298 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 LIN28AQ9H9Z2 209 aaKnown RBP19.78■□□□□ 0.76
PTPRF-207ENST00000436724 PRDM9Q9NQV7 894 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 NLGN3Q9NZ94 848 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 CD247P20963 164 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 GPR3P46089 330 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 NDUFA9Q16795 377 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 ZNF628Q5EBL2 1059 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 HIPK1Q86Z02 1210 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 OR2L13Q8N349 312 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 SLC16A11Q8NCK7 471 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 MIPOL1Q8TD10 442 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 TANKQ92844 425 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 MMABQ96EY8 250 aaPredicted RBP19.78■□□□□ 0.76
PTPRF-207ENST00000436724 RBM4BQ9BQ04 359 aaKnown RBP19.78■□□□□ 0.76
PTPRF-207ENST00000436724 RBM4Q9BWF3 364 aaKnown RBP19.78■□□□□ 0.76
PTPRF-207ENST00000436724 TOR3AQ9H497 397 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 REEP1Q9H902 201 aa19.78■□□□□ 0.76
PTPRF-207ENST00000436724 THUMPD1Q9NXG2 353 aaKnown RBP19.78■□□□□ 0.76
PTPRF-207ENST00000436724 ANKRD33BA6NCL7 494 aa19.77■□□□□ 0.76
PTPRF-207ENST00000436724 TMEM221A6NGB7 291 aa19.77■□□□□ 0.76
PTPRF-207ENST00000436724 M0R296 226 aa19.77■□□□□ 0.76
PTPRF-207ENST00000436724 NT5EP21589 574 aa19.77■□□□□ 0.76
PTPRF-207ENST00000436724 DNAJA1P31689 397 aaKnown RBP19.77■□□□□ 0.76
PTPRF-207ENST00000436724 FOXD4Q12950 439 aaPredicted RBP19.77■□□□□ 0.76
PTPRF-207ENST00000436724 PRAMEF17Q5VTA0 474 aa19.77■□□□□ 0.76
PTPRF-207ENST00000436724 DGAT2L6Q6ZPD8 337 aa19.77■□□□□ 0.76
PTPRF-207ENST00000436724 ERI1Q8IV48 349 aaKnown RBP19.77■□□□□ 0.76
PTPRF-207ENST00000436724 GEMIN6Q8WXD5 167 aaKnown RBP19.77■□□□□ 0.76
PTPRF-207ENST00000436724 ZNF300Q96RE9 604 aaPredicted RBP19.77■□□□□ 0.76
PTPRF-207ENST00000436724 WFDC6Q9BQY6 131 aa19.77■□□□□ 0.76
PTPRF-207ENST00000436724 QRSL1Q9H0R6 528 aaKnown RBP19.77■□□□□ 0.76
PTPRF-207ENST00000436724 GAREM1Q9H706 876 aa19.77■□□□□ 0.76
PTPRF-207ENST00000436724 TMEFF2Q9UIK5 374 aaPredicted RBP19.77■□□□□ 0.76
PTPRF-207ENST00000436724 CPED1A4D0V7 1026 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 HPRP00739 348 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 ALBP02768 609 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 ATP1B1P05026 303 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 CT62P0C5K7 136 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 PPP2R1BP30154 601 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 CRISP3P54108 245 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 GPLD1P80108 840 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 HSD11B2P80365 405 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 FAM53BQ14153 422 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 NR1D2Q14995 579 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 GPAT3Q53EU6 434 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 GUSBP11Q6P575 273 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 C11orf74Q86VG3 221 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 CYP4Z1Q86W10 505 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 LGI4Q8N135 537 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms