RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ZNF675Q8TD23 568 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 MARK4Q96L34 752 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 SIGLEC12Q96PQ1 595 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 ZBTB18Q99592 522 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 EPN3Q9H201 632 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 ASIC5Q9NY37 505 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 TAS2R9Q9NYW1 312 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 PRODH2Q9UF12 536 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 ATP6V1HQ9UI12 483 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 SNX8Q9Y5X2 465 aa14.38□□□□□ -0.11
TREX1-201ENST00000433541 NUP214P35658 2090 aaPredicted RBP14.38□□□□□ -0.11
TREX1-201ENST00000433541 A0A1W2PRB8 838 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 SUV39H1O43463 412 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 TBX19O60806 448 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 SLITRK5O94991 958 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 ABCB1P08183 1280 aaPredicted RBP14.37□□□□□ -0.11
TREX1-201ENST00000433541 VIMP08670 466 aaKnown RBP14.37□□□□□ -0.11
TREX1-201ENST00000433541 PRKAG1P54619 331 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 AQP5P55064 265 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 CLDN8P56748 225 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 STX1BP61266 288 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 PDE7AQ13946 482 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 SPDYE7PQ495Y7 208 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 ZNF468Q5VIY5 522 aaPredicted RBP14.37□□□□□ -0.11
TREX1-201ENST00000433541 OGFOD2Q6N063 350 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 FAM180AQ6UWF9 173 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 LRRC34Q8IZ02 419 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 CISD2Q8N5K1 135 aaKnown RBP14.37□□□□□ -0.11
TREX1-201ENST00000433541 ZNF615Q8N8J6 731 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 FAM13CQ8NE31 585 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 OR7G2Q8NG99 324 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 ZNF764Q96H86 408 aaPredicted RBP14.37□□□□□ -0.11
TREX1-201ENST00000433541 DUSP26Q9BV47 211 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 ITPAQ9BY32 194 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 TRIM4Q9C037 500 aa14.37□□□□□ -0.11
TREX1-201ENST00000433541 EXPH5Q8NEV8 1989 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 TMEM200CA6NKL6 621 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 UBDO15205 165 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 OR6B1O95007 311 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 RASAL1O95294 804 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 CBX7O95931 251 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 CLPSP04118 112 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 LAMP1P11279 417 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 IDO1P14902 403 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 GPX3P22352 226 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 SOAT1P35610 550 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 KRT20P35900 424 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 TMED10P49755 219 aaKnown RBP14.36□□□□□ -0.11
TREX1-201ENST00000433541 CLNS1AP54105 237 aaKnown RBP14.36□□□□□ -0.11
TREX1-201ENST00000433541 GUCY1A3Q02108 690 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 TLE1Q04724 770 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 MGAT2Q10469 447 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 CEBPEQ15744 281 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 MPEG1Q2M385 716 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 MAVSQ7Z434 540 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 GPALPP1Q8IXQ4 340 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 PRR22Q8IZ63 422 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 NATD1Q8N6N6 113 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 SIMC1Q8NDZ2 872 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 OR5M3Q8NGP4 307 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 CPT1CQ8TCG5 803 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 ERP27Q96DN0 273 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 CHMP6Q96FZ7 201 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 RILPQ96NA2 401 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 OR52B2Q96RD2 323 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 HES7Q9BYE0 225 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 C3orf14Q9HBI5 128 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 NPHS2Q9NP85 383 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 TIMMDC1Q9NPL8 285 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 EQTNQ9NQ60 294 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 TCF7L2Q9NQB0 619 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 ACSS1Q9NUB1 689 aaPredicted RBP14.36□□□□□ -0.11
TREX1-201ENST00000433541 AIG1Q9NVV5 245 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 PCDHGB4Q9UN71 923 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 OR10H1Q9Y4A9 318 aa14.36□□□□□ -0.11
TREX1-201ENST00000433541 COPG1Q9Y678 874 aaKnown RBP14.36□□□□□ -0.11
TREX1-201ENST00000433541 PRRC2CQ9Y520 2896 aaKnown RBP14.36□□□□□ -0.11
TREX1-201ENST00000433541 CAPN14A8MX76 684 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 E9PBE3 544 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 PLOD3O60568 738 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 SORBS2O94875 1100 aaKnown RBP14.35□□□□□ -0.11
TREX1-201ENST00000433541 TGDSO95455 350 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 SP1P08047 785 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 ALDOCP09972 364 aaKnown RBP14.35□□□□□ -0.11
TREX1-201ENST00000433541 TROVE2P10155 538 aaKnown RBP eCLIP14.35□□□□□ -0.11
TREX1-201ENST00000433541 S1PR1P21453 382 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 TRHRP34981 398 aaPredicted RBP14.35□□□□□ -0.11
TREX1-201ENST00000433541 ZNHIT3Q15649 155 aaPredicted RBP14.35□□□□□ -0.11
TREX1-201ENST00000433541 INPP5JQ15735 1006 aaPredicted RBP14.35□□□□□ -0.11
TREX1-201ENST00000433541 LSM12Q3MHD2 195 aaKnown RBP14.35□□□□□ -0.11
TREX1-201ENST00000433541 PRR30Q53SZ7 412 aaPredicted RBP14.35□□□□□ -0.11
TREX1-201ENST00000433541 PIGGQ5H8A4 983 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 TMEM198Q66K66 360 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 SLC25A25Q6KCM7 469 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 EPGNQ6UW88 154 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 TMEM64Q6YI46 380 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 RTL4Q6ZR62 310 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 GALNTL5Q7Z4T8 443 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 ARMC10Q8N2F6 343 aa14.35□□□□□ -0.11
TREX1-201ENST00000433541 SLC15A4Q8N697 577 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms