RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 CDK5Q00535 292 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 ADAM15Q13444 863 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 DSG2Q14126 1118 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 SF1Q15637 639 aaKnown RBP13.97□□□□□ -0.17
DDX56-205ENST00000433257 SYT14P1Q58G82 188 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 C22orf42Q6IC83 251 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 C1orf94Q6P1W5 598 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 LCTLQ6UWM7 567 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 DPY19L3Q6ZPD9 716 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 DPPA4Q7L190 304 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 HDDC2Q7Z4H3 204 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 MRGPREQ86SM8 312 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 TMEM150AQ86TG1 271 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 SLC38A5Q8WUX1 472 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 ZNF480Q8WV37 535 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 C1GALT1C1Q96EU7 318 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 ZNF582Q96NG8 517 aaPredicted RBP13.97□□□□□ -0.17
DDX56-205ENST00000433257 SLC6A16Q9GZN6 736 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 IRF2BPLQ9H1B7 796 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 ANKRD19PQ9H560 264 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 MED17Q9NVC6 651 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 TVP23BQ9NYZ1 205 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 ADAM29Q9UKF5 820 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 INSL5Q9Y5Q6 135 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 OBSL1O75147 1896 aa13.97□□□□□ -0.17
DDX56-205ENST00000433257 TRAV19A0A0A6YYK7 116 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 PLA2G10O15496 165 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 LYRM1O43325 122 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 IL3P08700 152 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 HSD17B2P37059 387 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 FRKP42685 505 aaPredicted RBP13.96□□□□□ -0.17
DDX56-205ENST00000433257 CAPZA2P47755 286 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 MANFP55145 182 aaKnown RBP13.96□□□□□ -0.17
DDX56-205ENST00000433257 P2RX3P56373 397 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 RRAS2P62070 204 aaPredicted RBP13.96□□□□□ -0.17
DDX56-205ENST00000433257 BDH1Q02338 343 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 EFR3AQ14156 821 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 GINS1Q14691 196 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 TATDN3Q17R31 274 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 MPEG1Q2M385 716 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 SPDYE7PQ495Y7 208 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 CRTC2Q53ET0 693 aaPredicted RBP13.96□□□□□ -0.17
DDX56-205ENST00000433257 ATAT1Q5SQI0 421 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 SNAP47Q5SQN1 464 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 BHLHB9Q6PI77 547 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 Q8N402 240 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 OR5AK3PQ8NH89 298 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 TEX47Q8TBZ9 253 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 SUN5Q8TC36 379 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 GNPDA2Q8TDQ7 276 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 DNAJA4Q8WW22 397 aaPredicted RBP13.96□□□□□ -0.17
DDX56-205ENST00000433257 AKAP1Q92667 903 aaKnown RBP eCLIP13.96□□□□□ -0.17
DDX56-205ENST00000433257 HLA-CQ95604 372 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 KCTD12Q96CX2 325 aaKnown RBP13.96□□□□□ -0.17
DDX56-205ENST00000433257 PRRC1Q96M27 445 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 SLC6A18Q96N87 628 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 KATNB1Q9BVA0 655 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 JAM3Q9BX67 310 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 BTBD1Q9H0C5 482 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 PPP1R3EQ9H7J1 279 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 CXorf36Q9H7Y0 433 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 PELI2Q9HAT8 420 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 TRIM39Q9HCM9 518 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 GIMAP4Q9NUV9 329 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 B3GNT2Q9NY97 397 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 TAAR2Q9P1P5 351 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 CFAP97Q9P2B7 532 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 KLF15Q9UIH9 416 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 ACSL6Q9UKU0 697 aa13.96□□□□□ -0.17
DDX56-205ENST00000433257 SF3B6Q9Y3B4 125 aaKnown RBP13.96□□□□□ -0.17
DDX56-205ENST00000433257 NUP214P35658 2090 aaPredicted RBP13.96□□□□□ -0.18
DDX56-205ENST00000433257 C17orf113A0A1B0GUU1 675 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 OR2AG2A6NM03 316 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 CASKO14936 926 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 TLX2O43763 284 aaPredicted RBP13.95□□□□□ -0.18
DDX56-205ENST00000433257 SNAPC5O75971 98 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 CRYZL1O95825 349 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 KLK1P06870 262 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 NNMTP40261 264 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 ATP12AP54707 1039 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 RACK1P63244 317 aaKnown RBP13.95□□□□□ -0.18
DDX56-205ENST00000433257 EFNB1P98172 346 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 CD83Q01151 205 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 TMEM115Q12893 351 aaPredicted RBP13.95□□□□□ -0.18
DDX56-205ENST00000433257 WSCD2Q2TBF2 565 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 DEF8Q6ZN54 512 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 SLC9B2Q86UD5 537 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 CCDC28AQ8IWP9 274 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 FAM109AQ8N4B1 249 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 YIPF7Q8N8F6 280 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 SMG7Q92540 1137 aaKnown RBP13.95□□□□□ -0.18
DDX56-205ENST00000433257 VOPP1Q96AW1 172 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 LRR1Q96L50 414 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 ARHGAP9Q9BRR9 750 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 TMEM43Q9BTV4 400 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 MKRN2Q9H000 416 aaKnown RBP13.95□□□□□ -0.18
DDX56-205ENST00000433257 PCBD2Q9H0N5 130 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 RHBGQ9H310 441 aa13.95□□□□□ -0.18
DDX56-205ENST00000433257 BCL2L10Q9HD36 194 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms