RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 BMP8AQ7Z5Y6 402 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 ABI3BPQ7Z7G0 1075 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 ZNF655Q8N720 491 aaPredicted RBP12.08□□□□□ -0.48
DDX56-204ENST00000431640 AQP11Q8NBQ7 271 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 SUN3Q8TAQ9 357 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 GPBAR1Q8TDU6 330 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 UTP15Q8TED0 518 aaKnown RBP12.08□□□□□ -0.48
DDX56-204ENST00000431640 APH1BQ8WW43 257 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 ELP4Q96EB1 424 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 SMIM10Q96HG1 83 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 OR2A14Q96R47 310 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 UCK2Q9BZX2 261 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 SERHL2Q9H4I8 314 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 ACOT13Q9NPJ3 140 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 NECTIN3Q9NQS3 549 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 POT1Q9NUX5 634 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 PSORS1C1Q9UIG5 152 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 ACAD8Q9UKU7 415 aa12.08□□□□□ -0.48
DDX56-204ENST00000431640 TP53BP1Q12888 1972 aaPredicted RBP12.07□□□□□ -0.48
DDX56-204ENST00000431640 TRBV23OR9-2A0A075B6M9 112 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 KIR2DS5A0A0G2JLQ3 304 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 A0A0G2JNG1 304 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 CLCA1A8K7I4 914 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 C2orf74A8MZ97 194 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 C4orf51C9J302 202 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 KIR2DS3K7RE56 304 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 FFAR1O14842 300 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 SLC22A1O15245 554 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 LAMTOR5O43504 91 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 B3GALT2O43825 422 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 STATHP02808 62 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 MT-ND2P03891 347 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 HMGN2P05204 90 aaKnown RBP12.07□□□□□ -0.48
DDX56-204ENST00000431640 OSMP13725 252 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 HOXB3P14651 431 aaPredicted RBP12.07□□□□□ -0.48
DDX56-204ENST00000431640 UGT2B7P16662 529 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 FEN1P39748 380 aaKnown RBP12.07□□□□□ -0.48
DDX56-204ENST00000431640 CSTF1Q05048 431 aaKnown RBP12.07□□□□□ -0.48
DDX56-204ENST00000431640 COX10Q12887 443 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 ILKQ13418 452 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 KIR2DS5Q14953 304 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 PTGES3Q15185 160 aaKnown RBP12.07□□□□□ -0.48
DDX56-204ENST00000431640 SMN1Q16637 294 aaKnown RBP12.07□□□□□ -0.48
DDX56-204ENST00000431640 ATAD3BQ5T9A4 648 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 AP1ARQ63HQ0 302 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 C18orf63Q68DL7 685 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 LAIR1Q6GTX8 287 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 FRMPD2BQ6IN97 320 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 ZNF770Q6IQ21 691 aaPredicted RBP12.07□□□□□ -0.48
DDX56-204ENST00000431640 LINC00299Q6ZSB3 139 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 ABHD13Q7L211 337 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 WDR5BQ86VZ2 330 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 ABCA7Q8IZY2 2146 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 NUP43Q8NFH3 380 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 OR9Q2Q8NGE9 314 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 CCL4L1Q8NHW4 92 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 FLVCR1-AS1Q8TAF5 88 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 JPH3Q8WXH2 748 aaPredicted RBP12.07□□□□□ -0.48
DDX56-204ENST00000431640 RSC1A1Q92681 617 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 UBE2FQ969M7 185 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 ZNF681Q96N22 645 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 OR2A5Q96R48 311 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 SIGLEC11Q96RL6 698 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 COPS4Q9BT78 406 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 PINK1Q9BXM7 581 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 ACTR10Q9NZ32 417 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 KLHL20Q9Y2M5 609 aa12.07□□□□□ -0.48
DDX56-204ENST00000431640 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 PRAMEF27A3QJZ7 478 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 GSAPA4D1B5 854 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 ZAR1LA6NP61 321 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 SYT5O00445 386 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 ZSCAN9O15535 394 aaPredicted RBP12.06□□□□□ -0.48
DDX56-204ENST00000431640 BCAS1O75363 584 aaPredicted RBP12.06□□□□□ -0.48
DDX56-204ENST00000431640 SLITRK5O94991 958 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 LGI1O95970 557 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 ZNF888P0CJ79 500 aaPredicted RBP12.06□□□□□ -0.48
DDX56-204ENST00000431640 CPN2P22792 545 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 IFNA8P32881 189 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 CTSKP43235 329 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 IDH2P48735 452 aaKnown RBP12.06□□□□□ -0.48
DDX56-204ENST00000431640 HPCAP84074 193 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 TNFRSF17Q02223 184 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 RPL6Q02878 288 aaKnown RBP12.06□□□□□ -0.48
DDX56-204ENST00000431640 LASP1Q14847 261 aaKnown RBP12.06□□□□□ -0.48
DDX56-204ENST00000431640 GPR19Q15760 415 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 NDUFA9Q16795 377 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 GPAT3Q53EU6 434 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 UBE2UQ5VVX9 321 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 DEF8Q6ZN54 512 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 RBM12BQ8IXT5 1001 aaKnown RBP12.06□□□□□ -0.48
DDX56-204ENST00000431640 TMEFF1Q8IYR6 380 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 SLC22A18ASQ8N1D0 253 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 DNAJC22Q8N4W6 341 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 KCT2Q8NC54 265 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 OR4K14Q8NGD5 310 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 OR5D16Q8NGK9 328 aa12.06□□□□□ -0.48
DDX56-204ENST00000431640 TRUB1Q8WWH5 349 aaKnown RBP12.06□□□□□ -0.48
DDX56-204ENST00000431640 GTPBP3Q969Y2 492 aaKnown RBP12.06□□□□□ -0.48
DDX56-204ENST00000431640 RERGQ96A58 199 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms