RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 YIPF2Q9BWQ6 316 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 MS4A12Q9NXJ0 267 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 FAM32AQ9Y421 112 aaKnown RBP15.65■□□□□ 0.1
USHBP1-203ENST00000431146 UNC13CQ8NB66 2214 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 ARID1BQ8NFD5 2236 aaPredicted RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 FFAR1O14842 300 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 CASC3O15234 703 aaKnown RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 JRKO75564 520 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 PDE9AO76083 593 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 AGXTP21549 392 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 SOX18P35713 384 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 RXRGP48443 463 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 KCNJ5P48544 419 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 AFF3P51826 1226 aaKnown RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 CRISP3P54108 245 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 TRMT12Q53H54 448 aaKnown RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 ZNF691Q5VV52 312 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 DEF8Q6ZN54 512 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 RBM44Q6ZP01 1051 aaKnown RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 UBALD2Q8IYN6 164 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 SLC5A8Q8N695 610 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 TTC29Q8NA56 475 aaPredicted RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 NCSTNQ92542 709 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 SGCDQ92629 289 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 MOAP1Q96BY2 351 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 ACER3Q9NUN7 267 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 GPC6Q9Y625 555 aaPredicted RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 PI4KAP42356 2102 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 A0A0A6YYC8 382 aaPredicted RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 IGHV5-51A0A0C4DH38 117 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 LILRA5A6NI73 299 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 I3L1I5 382 aaPredicted RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 SLC16A6O15403 523 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 ITGAMP11215 1152 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 PORP16435 677 aaPredicted RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 GSSP48637 474 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 MAN2A2P49641 1150 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 KCNC4Q03721 635 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 C14orf28Q4W4Y0 310 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 ZC3H12BQ5HYM0 836 aaKnown RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 MANEAQ5SRI9 462 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 USP53Q70EK8 1073 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 ZNF605Q86T29 641 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 C17orf82Q86X59 251 aaPredicted RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 LGI4Q8N135 537 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 DNAJC22Q8N4W6 341 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 SLC16A11Q8NCK7 471 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 CHDHQ8NE62 594 aaPredicted RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 OR10G2Q8NGC3 310 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 CNIH3Q8TBE1 160 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 ZNF354BQ96LW1 612 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.64■□□□□ 0.09
USHBP1-203ENST00000431146 HCN3Q9P1Z3 774 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 RNF215Q9Y6U7 377 aa15.64■□□□□ 0.09
USHBP1-203ENST00000431146 RHPN2P1A8MT19 583 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 M0R3H8 397 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 SERPINB7O75635 380 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 GADD45GO95257 159 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 POU2F1P14859 743 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 ETS2P15036 469 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 RHCEP18577 417 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 ISL1P61371 349 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 IL5RAQ01344 420 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 LAIR2Q6ISS4 152 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 Q6ZPB1 254 aaPredicted RBP15.63■□□□□ 0.09
USHBP1-203ENST00000431146 ARHGEF39Q8N4T4 335 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 SLC9A6Q92581 669 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 ZG16BQ96DA0 208 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 NIPSNAP1Q9BPW8 284 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 ANKHQ9HCJ1 492 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 SOHLH2Q9NX45 425 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 LRIT1Q9P2V4 623 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 SPACA6W5XKT8 324 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 RP1P56715 2156 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 CACNA1EQ15878 2313 aa15.63■□□□□ 0.09
USHBP1-203ENST00000431146 A0A087WXM4 84 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 CCDC160A6NGH7 325 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 TRIM64A6NGJ6 449 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 EEF1B2P24534 225 aaKnown RBP15.62■□□□□ 0.09
USHBP1-203ENST00000431146 FNTBP49356 437 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 ANXA11P50995 505 aaKnown RBP15.62■□□□□ 0.09
USHBP1-203ENST00000431146 OR1D5P58170 312 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 MICAQ29983 383 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 CNPY1Q3B7I2 92 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 KRT73Q86Y46 540 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 METTL27Q8N6F8 245 aaPredicted RBP15.62■□□□□ 0.09
USHBP1-203ENST00000431146 SLC35A4Q96G79 324 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 ACTRT3Q9BYD9 372 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 DUSP15Q9H1R2 295 aaPredicted RBP15.62■□□□□ 0.09
USHBP1-203ENST00000431146 CHST10O43529 356 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 CDC123O75794 336 aaPredicted RBP15.62■□□□□ 0.09
USHBP1-203ENST00000431146 EPPINO95925 133 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 MLLT3P42568 568 aaPredicted RBP15.62■□□□□ 0.09
USHBP1-203ENST00000431146 MAT1AQ00266 395 aaKnown RBP15.62■□□□□ 0.09
USHBP1-203ENST00000431146 CHRNEQ04844 493 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 NPRL3Q12980 569 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 KCNAB1Q14722 419 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 SYT16Q17RD7 645 aa15.62■□□□□ 0.09
USHBP1-203ENST00000431146 WDR45BQ5MNZ6 344 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms