RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SNX5Q9Y5X3 404 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 LYVE1Q9Y5Y7 322 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 FLNCQ14315 2725 aa4.16□□□□□ -1.74
HMGB3P5-201ENST00000428894 TDRD6O60522 2096 aaKnown RBP4.15□□□□□ -1.74
HMGB3P5-201ENST00000428894 RELNP78509 3460 aa4.15□□□□□ -1.74
HMGB3P5-201ENST00000428894 FAM170AA1A519 330 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 LRRC72A6NJI9 287 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 F8VP50 259 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 K7ENM7 598 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 PRKRAO75569 313 aaKnown RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 HPDP32754 393 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 ACSL1P33121 698 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 ATP5C1P36542 298 aaKnown RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 CCR10P46092 362 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 DUSP3P51452 185 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 CCNHP51946 323 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 BLVRAP53004 296 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 CLNS1AP54105 237 aaKnown RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 GTF2BQ00403 316 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 IL9RQ01113 521 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 MELKQ14680 651 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 TAF13Q15543 124 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 CTU2Q2VPK5 515 aaKnown RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 BOLA3Q53S33 107 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 FAM133BQ5BKY9 247 aaKnown RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 SPINK14Q6IE38 97 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 CCBE1Q6UXH8 406 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 LINGO4Q6UY18 593 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 NANOGNBQ7Z5D8 188 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 PIGZQ86VD9 579 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 MCEMP1Q8IX19 187 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 ARL14Q8N4G2 192 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 BMPERQ8N8U9 685 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF397Q8NF99 534 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 BRSK1Q8TDC3 778 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 DYDC1Q8WWB3 177 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 MYLPFQ96A32 169 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 ERLEC1Q96DZ1 483 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 PCED1BQ96HM7 432 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 CCNL2Q96S94 520 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 SLC2A11Q9BYW1 496 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 TRIM9Q9C026 710 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 NSRP1Q9H0G5 558 aaKnown RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 LHX5Q9H2C1 402 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 SNX25Q9H3E2 840 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 FBXO44Q9H4M3 255 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 PARVGQ9HBI0 331 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 CHMP1AQ9HD42 196 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 ELOVL2Q9NXB9 296 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 TAS2R14Q9NYV8 317 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 PAIP2BQ9ULR5 123 aaKnown RBP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 SATB2Q9UPW6 733 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 TMED5Q9Y3A6 229 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 STYXL1Q9Y6J8 313 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 ATP8B3O60423 1300 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 PTPRJQ12913 1337 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 DOPEY1Q5JWR5 2465 aa4.15□□□□□ -1.75
HMGB3P5-201ENST00000428894 LRRK2Q5S007 2527 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 A0A0B4J203 849 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 LOC101059948A0A1B0GTJ6 334 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 A0A1W2PR77 199 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 TLR4O00206 839 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 ATP8B1O43520 1251 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 RNASEH1O60930 286 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 DUS4LO95620 317 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 GP1BAP07359 652 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 TROVE2P10155 538 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 ALPPL2P10696 532 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 FDPSP14324 419 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 PRLRP16471 622 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 WARSP23381 471 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 LMO2P25791 158 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 NUDT1P36639 197 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 SLC12A3P55017 1021 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 MFAP3P55082 362 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 CLDN6P56747 220 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 GEMIN4P57678 1058 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 OVGP1Q12889 678 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 KRT33BQ14525 404 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 FAM98BQ52LJ0 330 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 MDH1BQ5I0G3 518 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 HYIQ5T013 277 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 GRTP1Q5TC63 336 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 THOC7Q6I9Y2 204 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 FIP1L1Q6UN15 594 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 INTS8Q75QN2 995 aaKnown RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 TTC39CQ8N584 583 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 TMCO5AQ8N6Q1 288 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 IQUBQ8NA54 791 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 SMYD1Q8NB12 490 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 OR4C3Q8NH37 302 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 RNF128Q8TEB7 428 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 GANCQ8TET4 914 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNRF4Q8WWF5 429 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 LZICQ8WZA0 190 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF75CPQ92670 426 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 PPP1R14BQ96C90 147 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 HPDLQ96IR7 371 aa4.14□□□□□ -1.75
HMGB3P5-201ENST00000428894 ANKRD36BP1Q96IX9 119 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms