RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 OR10A5Q9H207 317 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 PCDHGA11Q9Y5H2 935 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 ROS1P08922 2347 aa16.68■□□□□ 0.26
UPK3BP1-201ENST00000428678 SMAD7O15105 426 aaKnown RBP16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 PGRMC2O15173 223 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 TP73O15350 636 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 CDH16O75309 829 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 GBAP04062 536 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 CT62P0C5K7 136 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 PIK3R1P27986 724 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 SSTR1P30872 391 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 BSGP35613 385 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 GP5P40197 560 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 ARFIP1P53367 373 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 FUT7Q11130 342 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 NNATQ16517 81 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 RAPH1Q70E73 1250 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 CIARTQ8N365 385 aaPredicted RBP16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 ZNF615Q8N8J6 731 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 PYROXD1Q8WU10 500 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 DDX31Q9H8H2 851 aaKnown RBP16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 ACTR8Q9H981 624 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 SERHLQ9NQF3 203 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 FETUBQ9UGM5 382 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 NDRG3Q9UGV2 375 aa16.67■□□□□ 0.26
UPK3BP1-201ENST00000428678 C2orf72A6NCS6 295 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 EFCAB8A8MWE9 144 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 KERAO60938 352 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 RCBTB2O95199 551 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 ABCB1P08183 1280 aaPredicted RBP16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 CPN1P15169 458 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 NT5EP21589 574 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 CPOXP36551 454 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 DIO3P55073 304 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 DLG1Q12959 904 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 KBTBD12Q3ZCT8 623 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 ENPP6Q6UWR7 440 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 ISCA2Q86U28 154 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 NUDT13Q86X67 352 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 OR14L1PQ8NHC6 308 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 RDH11Q8TC12 318 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 WNT2BQ93097 391 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 NTNG2Q96CW9 530 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 REPS1Q96D71 796 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 Q96MF0 132 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 ATOH8Q96SQ7 321 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 NXF5Q9H1B4 397 aaKnown RBP16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 ACBD3Q9H3P7 528 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 PIGMQ9H3S5 423 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 NMRAL1Q9HBL8 299 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 MAPRE3Q9UPY8 281 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 TSC22D4Q9Y3Q8 395 aa16.66■□□□□ 0.26
UPK3BP1-201ENST00000428678 SNPHO15079 494 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 PPM1BO75688 479 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 TCP1P17987 556 aaKnown RBP16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 CUL3Q13618 768 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 SLMAPQ14BN4 828 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 CPSF6Q16630 551 aaKnown RBP eCLIP16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 LIPJQ5W064 366 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 DESI1Q6ICB0 168 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 CMC1Q7Z7K0 106 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 TBC1D1Q86TI0 1168 aaPredicted RBP16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 LRRC75A-AS1Q8N1F1 130 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 LRRN4CLQ8ND94 238 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 C17orf47Q8NEP4 570 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 OR7G1Q8NGA0 311 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 OR4K14Q8NGD5 310 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 PIGTQ969N2 578 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 PIP5K1AQ99755 562 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 OSBPL11Q9BXB4 747 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 GALNT9Q9HCQ5 603 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 SAYSD1Q9NPB0 183 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 KLRF1Q9NZS2 232 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 C6orf203Q9P0P8 240 aaPredicted RBP16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 PACSIN3Q9UKS6 424 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 DTX4Q9Y2E6 619 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 SNX24Q9Y343 169 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 TESMINQ9Y4I5 508 aa16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 SONP18583 2426 aaKnown RBP16.65■□□□□ 0.26
UPK3BP1-201ENST00000428678 DSCAMO60469 2012 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 MXRA5Q9NR99 2828 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 H0YIV9 168 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 ICOSLGO75144 302 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 GPX3P22352 226 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 SPRP35270 261 aaPredicted RBP16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 XKP51811 444 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 SLC30A6Q6NXT4 461 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 YTHDF3Q7Z739 585 aaKnown RBP16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 GRAMD2AQ8IUY3 354 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 TRIM42Q8IWZ5 723 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 CTAGE3PQ8IX95 158 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 NODALQ96S42 347 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 BDH2Q9BUT1 245 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 UBTD1Q9HAC8 227 aa16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 FBN1P35555 2871 aaKnown RBP16.64■□□□□ 0.25
UPK3BP1-201ENST00000428678 TCRBV9S1A1TA0A576 114 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 FAM159BA6NKW6 160 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 A8MXE2 369 aa16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 LTA4HP09960 611 aaKnown RBP16.63■□□□□ 0.25
UPK3BP1-201ENST00000428678 GFAPP14136 432 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms