RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 NSG1A0A0A6YYJ2 146 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 TRBV11-1A0A0K0K1C0 115 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 CDC14CA4D256 554 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 EVPLLA8MZ36 301 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 CLIC1O00299 241 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 UPK1AO00322 258 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 PLOD2O00469 737 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 KLK10O43240 276 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 NME6O75414 186 aaPredicted RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 CREG1O75629 220 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 BCAS2O75934 225 aaPredicted RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 DDAH2O95865 285 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 CBX7O95931 251 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 IFI6P09912 130 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 PRKAR1AP10644 381 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 COX6A1P12074 109 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 HOXB9P17482 250 aaPredicted RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC6A2P23975 617 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 CPOXP36551 454 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 CRATP43155 626 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 PRIM2P49643 509 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 CASP9P55211 416 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC26A5P58743 744 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 MGAT2Q10469 447 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 FUT7Q11130 342 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 MAP4K2Q12851 820 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 SRSF6Q13247 344 aaKnown RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 ATP1A4Q13733 1029 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 SELPLGQ14242 412 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 SSPNQ14714 243 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 PCOLCEQ15113 449 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 EXT1Q16394 746 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 NNATQ16517 81 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 CYP51A1Q16850 503 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 BTBD16Q32M84 506 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 RUNDC3AQ59EK9 446 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 FHL5Q5TD97 284 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 SAXO2Q658L1 398 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 NANOGP8Q6NSW7 305 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 MFSD12Q6NUT3 480 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 TNFAIP8L2Q6P589 184 aaPredicted RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 KIRREL2Q6UWL6 708 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 RNF111Q6ZNA4 994 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 C6orf120Q7Z4R8 191 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 WDR53Q7Z5U6 358 aaPredicted RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 KIF2BQ8N4N8 673 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF321PQ8N8H1 164 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 MORN4Q8NDC4 146 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF248Q8NDW4 579 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 SIMC1Q8NDZ2 872 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 B3GNT7Q8NFL0 401 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR7G1Q8NGA0 311 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR11G2Q8NGC1 345 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZFP90Q8TF47 636 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 FGF11Q92914 225 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 NCLNQ969V3 563 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 CTHRC1Q96CG8 243 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 OTUB1Q96FW1 271 aaPredicted RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 SENP5Q96HI0 755 aaPredicted RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 PHF12Q96QT6 1004 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 GAL3ST4Q96RP7 486 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 GPATCH1Q9BRR8 931 aaKnown RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 YIPF4Q9BSR8 244 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF700Q9H0M5 742 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 IKZF5Q9H5V7 419 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 CCDC86Q9H6F5 360 aaKnown RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 NANOGQ9H9S0 305 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF160Q9HCG1 818 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 P4HTMQ9NXG6 502 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 TAS2R1Q9NYW7 299 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 ANGPTL2Q9UKU9 493 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 C19orf53Q9UNZ5 99 aaPredicted RBP7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 ERVK-11Q9UQG0 969 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 SPTBN2O15020 2390 aa7.37□□□□□ -1.23
HMGA1P4-201ENST00000428643 KIF26BQ2KJY2 2108 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 SOCS6O14544 535 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 PDE5AO76074 875 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 HPP00738 406 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 C1QCP02747 245 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 IGKV3-11P04433 115 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 HMGN2P05204 90 aaKnown RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 ALOX5P09917 674 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 ETFAP13804 333 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 PGM1P36871 562 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC37A1P57057 533 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 DSTNP60981 165 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 HPCAP84074 193 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 LIPEQ05469 1076 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 VAC14Q08AM6 782 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 DUSP8Q13202 625 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNHIT3Q15649 155 aaPredicted RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 LACTB2Q53H82 288 aaPredicted RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 SAMD4BQ5PRF9 694 aaKnown RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 COX20Q5RI15 118 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 GCNT6Q5T4J0 391 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 HLA-DQA1Q5Y7H0 255 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 C8orf82Q6P1X6 216 aaPredicted RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 HSDL2Q6YN16 418 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 NDUFAF7Q7L592 441 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms