RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 NUDCD3Q8IVD9 361 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 CLHC1Q8NHS4 586 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 TWIST2Q8WVJ9 160 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 SPACA9Q96E40 222 aaPredicted RBP13.71□□□□□ -0.21
RTN4-210ENST00000427710 TRMOQ9BU70 441 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 ITPAQ9BY32 194 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 KCNK9Q9NPC2 374 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 SLC35C2Q9NQQ7 365 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 SACM1LQ9NTJ5 587 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 C1orf109Q9NX04 203 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 TUBA8Q9NY65 449 aaPredicted RBP13.71□□□□□ -0.21
RTN4-210ENST00000427710 ZNF639Q9UID6 485 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 ZDHHC2Q9UIJ5 367 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 TINAGQ9UJW2 476 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 EXO1Q9UQ84 846 aaKnown RBP13.71□□□□□ -0.21
RTN4-210ENST00000427710 ENTPD4Q9Y227 616 aa13.71□□□□□ -0.21
RTN4-210ENST00000427710 RGS14O43566 566 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 AKAP10O43572 662 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 SKAP2O75563 359 aaPredicted RBP13.7□□□□□ -0.22
RTN4-210ENST00000427710 P04436 131 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 FBXO45P0C2W1 286 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 PPIAP62937 165 aaKnown RBP13.7□□□□□ -0.22
RTN4-210ENST00000427710 RPL38P63173 70 aaKnown RBP13.7□□□□□ -0.22
RTN4-210ENST00000427710 HEPACAMQ14CZ8 416 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 UGT3A2Q3SY77 523 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 ZNF628Q5EBL2 1059 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 CMPK2Q5EBM0 449 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 BICRALQ6AI39 1079 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 FAM47EQ6ZV65 393 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 CHERPQ8IWX8 916 aaKnown RBP13.7□□□□□ -0.22
RTN4-210ENST00000427710 ZFP62Q8NB50 900 aaPredicted RBP13.7□□□□□ -0.22
RTN4-210ENST00000427710 GOLM1Q8NBJ4 401 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 POGLUT1Q8NBL1 392 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 OR7G1Q8NGA0 311 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 PPP1R14CQ8TAE6 165 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 CTHRC1Q96CG8 243 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 BBS4Q96RK4 519 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 NXF5Q9H1B4 397 aaKnown RBP13.7□□□□□ -0.22
RTN4-210ENST00000427710 PROK2Q9HC23 129 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 EML4Q9HC35 981 aaKnown RBP13.7□□□□□ -0.22
RTN4-210ENST00000427710 SH2D2AQ9NP31 389 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 MYNNQ9NPC7 610 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 SENP1Q9P0U3 644 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 BAIAP2L1Q9UHR4 511 aa13.7□□□□□ -0.22
RTN4-210ENST00000427710 ARHGAP21Q5T5U3 1957 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 A0A1B0GTH9 108 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 CCL21O00585 134 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 SLC19A2O60779 497 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 ZG16O60844 167 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 CHEK2O96017 543 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 JUNP05412 331 aaKnown RBP13.69□□□□□ -0.22
RTN4-210ENST00000427710 TUBBP07437 444 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 DDCP20711 480 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 PRPH2P23942 346 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 RBPJQ06330 500 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 CHI3L2Q15782 390 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 KRTCAP3Q53RY4 240 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 TNFAIP8L3Q5GJ75 292 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 SLC22A10Q63ZE4 541 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 NCCRP1Q6ZVX7 275 aaPredicted RBP13.69□□□□□ -0.22
RTN4-210ENST00000427710 CLYBLQ8N0X4 340 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 TAGAPQ8N103 731 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 GHDCQ8N2G8 530 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 SLC15A4Q8N697 577 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 ANKRD42Q8N9B4 389 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 OR6Y1Q8NGX8 325 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.69□□□□□ -0.22
RTN4-210ENST00000427710 MAGED4Q96JG8 741 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 SGCZQ96LD1 299 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 C3orf30Q96M34 536 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 TSSK3Q96PN8 268 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 FAM173AQ9BQD7 235 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 TTTY12Q9BZ98 90 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 GIMAP4Q9NUV9 329 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 EHD3Q9NZN3 535 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 NPFFR2Q9Y5X5 522 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 LIPGQ9Y5X9 500 aa13.69□□□□□ -0.22
RTN4-210ENST00000427710 ATP6AP2A0A1C7CYW4 349 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 WIPF3A6NGB9 483 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 MYO1GB0I1T2 1018 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 LSM1O15116 133 aaKnown RBP13.68□□□□□ -0.22
RTN4-210ENST00000427710 ATP6AP2O75787 350 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 CLDN1O95832 211 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 FGF4P08620 206 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 CELA3AP09093 270 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 ABOP16442 354 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 SDC1P18827 310 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 COL8A1P27658 744 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 CA7P43166 264 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 EMDP50402 254 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 NCBP2P52298 156 aaKnown RBP eCLIP13.68□□□□□ -0.22
RTN4-210ENST00000427710 FOXO1Q12778 655 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 NTRK2Q16620 822 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 RFTN2Q52LD8 501 aaPredicted RBP13.68□□□□□ -0.22
RTN4-210ENST00000427710 ZNF385BQ569K4 471 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 BEND6Q5SZJ8 279 aaPredicted RBP13.68□□□□□ -0.22
RTN4-210ENST00000427710 LRIG3Q6UXM1 1119 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 C3P1Q6ZMU1 363 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 SPPL2CQ8IUH8 684 aa13.68□□□□□ -0.22
RTN4-210ENST00000427710 FAM9CQ8IZT9 166 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms