RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 GOLGB1Q14789 3259 aaKnown RBP4.75□□□□□ -1.65
LINC00458-202ENST00000427299 HELZP42694 1942 aaKnown RBP4.75□□□□□ -1.65
LINC00458-202ENST00000427299 TEX13CA0A0J9YWL9 993 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 RNF103-CHMP3A0A140T963 221 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 A0A1W2PQ09 198 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 SH3PXD2BA1X283 911 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 PRORSD1PA6NEY8 169 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 SUPT3HB4E1H0 165 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 E9PAM4 449 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 FAM72CH0Y354 149 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 GOLGA8TH3BQL2 631 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 IFNL4K9M1U5 179 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 CLDN5O00501 218 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 PTGESO14684 152 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ARPC2O15144 300 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ADAM20O43506 726 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 HCRTO43612 131 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 SUPT3HO75486 399 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 EEDO75530 441 aaKnown RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 OR6B1O95007 311 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 CPNE6O95741 557 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 MT-CYBP00156 380 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 LDLRP01130 860 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 IL1AP01583 271 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 FGF4P08620 206 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 CDH1P12830 882 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ZNF12P17014 697 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 TYMPP19971 482 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ATP6V1B2P21281 511 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 YWHAQP27348 245 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 DCKP27707 260 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 GCH1P30793 250 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 PBX3P40426 434 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 TPD52P55327 224 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 C1QTNF8P60827 252 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 PITX1P78337 314 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 MRPS6P82932 125 aaKnown RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 CDKL1Q00532 357 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 PLOD1Q02809 727 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ACVR1Q04771 509 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 RAD51Q06609 339 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 MERTKQ12866 999 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 TMEM115Q12893 351 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 RALGDSQ12967 914 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 OLIG2Q13516 323 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ZNF235Q14590 738 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 IRF3Q14653 427 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 TYSND1Q2T9J0 566 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 RFX4Q33E94 735 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 RBM48Q5RL73 367 aaKnown RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 OTUD3Q5T2D3 398 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 FAM72AQ5TYM5 149 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 MARC1Q5VT66 337 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 FAM72DQ6L9T8 149 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 UGT3A1Q6NUS8 523 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 IYDQ6PHW0 289 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 SPSB3Q6PJ21 355 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 CNSTQ6PJW8 725 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 KDELC1Q6UW63 502 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 LINC00299Q6ZSB3 139 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 USP50Q70EL3 339 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 GET4Q7L5D6 327 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 RRM2BQ7LG56 351 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 GPR180Q86V85 440 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 FAM72BQ86X60 149 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 TMC8Q8IU68 726 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 CLVS1Q8IUQ0 354 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 CEP97Q8IW35 865 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ARHGAP12Q8IWW6 846 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 FAM9CQ8IZT9 166 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 STK40Q8N2I9 435 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ZNF786Q8N393 782 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 FBXO39Q8N4B4 442 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 DHRSXQ8N5I4 330 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 PCDH20Q8N6Y1 951 aaKnown RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 RNF148Q8N7C7 305 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 SMYD1Q8NB12 490 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 STAG3L4Q8TBR4 150 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ADAMTS16Q8TE57 1224 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 RSPH1Q8WYR4 309 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 TUBGCP3Q96CW5 907 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 IMP4Q96G21 291 aaKnown RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 CELF6Q96J87 481 aaKnown RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ZNF599Q96NL3 588 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 DOK1Q99704 481 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 CIB1Q99828 191 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 OMDQ99983 421 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 GPATCH1Q9BRR8 931 aaKnown RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 C1orf50Q9BV19 199 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ZYG11BQ9C0D3 744 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 DERL2Q9GZP9 239 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ING2Q9H160 280 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 FBXO44Q9H4M3 255 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 TFB2MQ9H5Q4 396 aaKnown RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 ALG9Q9H6U8 611 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 COQ10BQ9H8M1 238 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 SDR39U1Q9NRG7 319 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 RBM22Q9NW64 420 aaKnown RBP eCLIP4.74□□□□□ -1.65
LINC00458-202ENST00000427299 COMMD8Q9NX08 183 aa4.74□□□□□ -1.65
LINC00458-202ENST00000427299 TAS2R13Q9NYV9 303 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms