RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 ZFR2Q9UPR6 939 aaKnown RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 SNTNA6NMZ2 147 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 ATP6V1G2-DDX39BF2Z307 99 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 MPZL2O60487 215 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 GREM1O60565 184 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 RAB36O95755 333 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 H1F0P07305 194 aaKnown RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 TFPIP10646 304 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 PXNP49023 591 aaPredicted RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 RNF144AP50876 292 aaPredicted RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 PER3P56645 1201 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 SYTL3Q4VX76 610 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 TEX261Q6UWH6 196 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 IDO2Q6ZQW0 420 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 C2orf15Q8WU43 125 aaKnown RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 KLK6Q92876 244 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 POP5Q969H6 163 aaKnown RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 ARSGQ96EG1 525 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 ZNF582Q96NG8 517 aaPredicted RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 TMEM43Q9BTV4 400 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 REEP4Q9H6H4 257 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 NIPAL2Q9H841 368 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 EIF3KQ9UBQ5 218 aaKnown RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 BTNL2Q9UIR0 455 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 RABL2BQ9UNT1 228 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 ANGPT4Q9Y264 503 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 U3KQ87 197 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 ZC3H12DA2A288 527 aaKnown RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 FAM183AA6NL82 134 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 IGSF6O95976 241 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 LIMS1P48059 325 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 CCR6P51684 374 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 WNT4P56705 351 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 CLDN20P56880 219 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 BNC1Q01954 994 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 SLBPQ14493 270 aaKnown RBP eCLIP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 ARHGEF6Q15052 776 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 PODNL1Q6PEZ8 512 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 ESPNLQ6ZVH7 1005 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 Q6ZVL8 140 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 LRRC17Q8N6Y2 441 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 OR2AP1Q8NGE2 309 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 HMGB4Q8WW32 186 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 ZFP3Q96NJ6 502 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 SLAMF7Q9NQ25 335 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 TRPC4Q9UBN4 977 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 B4GALT6Q9UBX8 382 aa12.75□□□□□ -0.37
LRCH3-203ENST00000425562 HELZP42694 1942 aaKnown RBP12.75□□□□□ -0.37
LRCH3-203ENST00000425562 A0A0B4J203 849 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 TRBV5-4A0A0C4DH59 114 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 A0A1W2PRU2 124 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 ANHXE9PGG2 379 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 TSPAN6O43657 245 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 CHP2O43745 196 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 INHAP05111 366 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 CD3GP09693 182 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 POLR2CP19387 275 aaPredicted RBP12.74□□□□□ -0.37
LRCH3-203ENST00000425562 MMP11P24347 488 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 EPHA5P54756 1037 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 SYPL1Q16563 259 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 GGTA1PQ4G0N0 100 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 LHX8Q68G74 356 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 TMEM65Q6PI78 240 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 MSANTD1Q6ZTZ1 278 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 SYT9Q86SS6 491 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 BBS10Q8TAM1 723 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 SMG7Q92540 1137 aaKnown RBP12.74□□□□□ -0.37
LRCH3-203ENST00000425562 UFD1Q92890 307 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 CLP1Q92989 425 aaKnown RBP12.74□□□□□ -0.37
LRCH3-203ENST00000425562 ATF6BQ99941 703 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 GTPBP2Q9BX10 602 aaKnown RBP12.74□□□□□ -0.37
LRCH3-203ENST00000425562 C1QTNF7Q9BXJ2 289 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 PAK6Q9NQU5 681 aaPredicted RBP12.74□□□□□ -0.37
LRCH3-203ENST00000425562 KLHL1Q9NR64 748 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 THSD1Q9NS62 852 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 STOX2Q9P2F5 926 aaPredicted RBP12.74□□□□□ -0.37
LRCH3-203ENST00000425562 SEC14L3Q9UDX4 400 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 PLAGL1Q9UM63 463 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 CORO2BQ9UQ03 480 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 GSTK1Q9Y2Q3 226 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 THSD7BQ9C0I4 1608 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 SPTBP11277 2137 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 SIGLEC5O15389 551 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 RFPL3O75679 317 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 PROS1P07225 676 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 C8GP07360 202 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 ATP1B2P14415 290 aaPredicted RBP12.74□□□□□ -0.37
LRCH3-203ENST00000425562 PPIBP23284 216 aaKnown RBP12.74□□□□□ -0.37
LRCH3-203ENST00000425562 CTSCP53634 463 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 SIGLEC14Q08ET2 396 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 ZNF763Q0D2J5 394 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 RAET1GQ6H3X3 334 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 TMEM91Q6ZNR0 172 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 ZER1Q7Z7L7 766 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 KLBQ86Z14 1044 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 CLDN22Q8N7P3 220 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 SAMD12Q8N8I0 201 aa12.74□□□□□ -0.37
LRCH3-203ENST00000425562 KAT2AQ92830 837 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms