RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 MAGED4Q96JG8 741 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 CLPTM1LQ96KA5 538 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 SLC46A1Q96NT5 459 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 GPR87Q9BY21 358 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 ACTRT3Q9BYD9 372 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 TRIM15Q9C019 465 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 VN1R1Q9GZP7 353 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 CHST8Q9H2A9 424 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 TMEM38AQ9H6F2 299 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 ADAP2Q9NPF8 381 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 NECTIN3Q9NQS3 549 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 PNO1Q9NRX1 252 aaKnown RBP9.66□□□□□ -0.86
MDC1-205ENST00000425072 SIRT3Q9NTG7 399 aaPredicted RBP9.66□□□□□ -0.86
MDC1-205ENST00000425072 EXD2Q9NVH0 621 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 GIN1Q9NXP7 522 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 PRODH2Q9UF12 536 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 C3orf18Q9UK00 162 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 LIPT1Q9Y234 373 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 POMPQ9Y244 141 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 ASPMQ8IZT6 3477 aa9.66□□□□□ -0.86
MDC1-205ENST00000425072 IGKV3D-11A0A0A0MRZ8 115 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 FAM220BPB1ANY3 271 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 C17orf105B2RV13 164 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 C9orf172C9J069 976 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 ASNA1O43681 348 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 BRINP1O60477 761 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 ALOX12BO75342 701 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 JRKO75564 520 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 PDE5AO76074 875 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 IFNA14P01570 189 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 HMGN2P05204 90 aaKnown RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 BMP2P12643 396 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 HOXB6P17509 224 aaKnown RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 TCN1P20061 433 aaPredicted RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 TCN2P20062 427 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 SLC5A2P31639 672 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 OR4D2P58180 307 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 DUSP2Q05923 314 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 MGAT2Q10469 447 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 FUT7Q11130 342 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 SELPLGQ14242 412 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 ZNHIT3Q15649 155 aaPredicted RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 RSPO4Q2I0M5 234 aaPredicted RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 ZNF630Q2M218 657 aaPredicted RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 VMACQ2NL98 169 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 TRMT12Q53H54 448 aaKnown RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 MTX3Q5HYI7 312 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 GCNT6Q5T4J0 391 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 FAM111BQ6SJ93 734 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 IGF2-ASQ6U949 168 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 SZRD1Q7Z422 152 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 RNF130Q86XS8 419 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 NLGN4XQ8N0W4 816 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 VWA5B2Q8N398 1253 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 CDRT4Q8N9R6 151 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 FAM13CQ8NE31 585 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 NLGN4YQ8NFZ3 816 aaPredicted RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 OR5AK3PQ8NH89 298 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 XAGE5Q8WWM1 108 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 AURKBQ96GD4 344 aaPredicted RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 SENP5Q96HI0 755 aaPredicted RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 SLC35G5Q96KT7 338 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 MS4A4EQ96PG1 132 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 RBCK1Q9BYM8 510 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 TRIM4Q9C037 500 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 NRSN2Q9GZP1 204 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 GORASP2Q9H8Y8 452 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 MAT2BQ9NZL9 334 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 CALML5Q9NZT1 146 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 ACTR3BQ9P1U1 418 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 ZNF639Q9UID6 485 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 MAGEL2Q9UJ55 1249 aa9.65□□□□□ -0.86
MDC1-205ENST00000425072 FARSAQ9Y285 508 aaKnown RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 COL27A1Q8IZC6 1860 aaPredicted RBP9.65□□□□□ -0.86
MDC1-205ENST00000425072 CNOT1A5YKK6 2376 aaKnown RBP9.64□□□□□ -0.87
MDC1-205ENST00000425072 MYOCOSA0A1B0GUC4 107 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 OR2W5A6NFC9 320 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 AQP12BA6NM10 295 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 C21orf140B9A014 251 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 C5orf58C9J3I9 102 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 STMND1H3BQB6 276 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 PRAMEF2O60811 474 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 TNFRSF21O75509 655 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 DLGAP3O95886 979 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 ALOX5P09917 674 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 UMPSP11172 480 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 MSX2P35548 267 aaPredicted RBP9.64□□□□□ -0.87
MDC1-205ENST00000425072 MC3RP41968 323 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 KHKP50053 298 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 GZMMP51124 257 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 DSTNP60981 165 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 ACTR3P61158 418 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 DCAF7P61962 342 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 CDK6Q00534 326 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 MS4A2Q01362 244 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 GAB1Q13480 694 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 FLOT2Q14254 428 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 SSPNQ14714 243 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 NCF4Q15080 339 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 FXNQ16595 210 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms