RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GALNTL6Q49A17 601 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 BEND6Q5SZJ8 279 aaPredicted RBP10.1□□□□□ -0.79
USP49-204ENST00000423567 HHATQ5VTY9 493 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 FAM71E1Q6IPT2 247 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 PAOXQ6QHF9 649 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 FAM111BQ6SJ93 734 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 BNC2Q6ZN30 1099 aaPredicted RBP10.1□□□□□ -0.79
USP49-204ENST00000423567 RGS9BPQ6ZS82 235 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 SLC22A16Q86VW1 577 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 KIRREL3Q8IZU9 778 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 ZNF615Q8N8J6 731 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 ZFP62Q8NB50 900 aaPredicted RBP10.1□□□□□ -0.79
USP49-204ENST00000423567 OR52R1Q8NGF1 315 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 OR9A2Q8NGT5 310 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 C16orf52Q8NHV5 167 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 ZNF675Q8TD23 568 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 ZBTB9Q96C00 473 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 PPP3R2Q96LZ3 170 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 ZNF681Q96N22 645 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 PAIP2Q9BPZ3 127 aaKnown RBP10.1□□□□□ -0.79
USP49-204ENST00000423567 CNIH4Q9P003 139 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 ERRFI1Q9UJM3 462 aaPredicted RBP10.1□□□□□ -0.79
USP49-204ENST00000423567 CCL27Q9Y4X3 112 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 PTGDR2Q9Y5Y4 395 aa10.1□□□□□ -0.79
USP49-204ENST00000423567 ESPL1Q14674 2120 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 G3V3Y1 287 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 ZNF354AO60765 605 aaPredicted RBP10.09□□□□□ -0.79
USP49-204ENST00000423567 SLC19A2O60779 497 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 SLITRK5O94991 958 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 STSP08842 583 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 CCL3P10147 92 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 ABOP16442 354 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 PCSK2P16519 638 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 S1PR1P21453 382 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 GPX3P22352 226 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 PTGER1P34995 402 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 RFC3P40938 356 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 NCBP2P52298 156 aaKnown RBP eCLIP10.09□□□□□ -0.79
USP49-204ENST00000423567 PPIAP62937 165 aaKnown RBP10.09□□□□□ -0.79
USP49-204ENST00000423567 KCNJ2P63252 427 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 PSPHP78330 225 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 MRPS35P82673 323 aaKnown RBP10.09□□□□□ -0.79
USP49-204ENST00000423567 DUSP2Q05923 314 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 MGAT2Q10469 447 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 EXOSC7Q15024 291 aaKnown RBP10.09□□□□□ -0.79
USP49-204ENST00000423567 KIAA0040Q15053 153 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 RPS6KA2Q15349 733 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 LTB4RQ15722 352 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 CEBPEQ15744 281 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 ZNF791Q3KP31 576 aaPredicted RBP10.09□□□□□ -0.79
USP49-204ENST00000423567 ATP6AP1LQ52LC2 224 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 TRMT12Q53H54 448 aaKnown RBP10.09□□□□□ -0.79
USP49-204ENST00000423567 ZNF628Q5EBL2 1059 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 TNFAIP8L3Q5GJ75 292 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 LIAT1Q6ZQX7 453 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 Q6ZSR9 355 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 SIAH3Q8IW03 269 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 FBXW8Q8N3Y1 598 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 ZNF441Q8N8Z8 693 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 ANKRD42Q8N9B4 389 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 OR2M7Q8NG81 312 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 OR5M3Q8NGP4 307 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 OR2T11Q8NH01 316 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 PAQR8Q8TEZ7 354 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 ADIPOR1Q96A54 375 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 CTHRC1Q96CG8 243 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 HSPBAP1Q96EW2 488 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 LCORQ96JN0 433 aaPredicted RBP10.09□□□□□ -0.79
USP49-204ENST00000423567 TUBB1Q9H4B7 451 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 DEPPQ9NTK1 212 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 NKIRAS1Q9NYS0 192 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 TAS2R7Q9NYW3 318 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 SUCOQ9UBS9 1254 aaKnown RBP10.09□□□□□ -0.79
USP49-204ENST00000423567 NPFFR2Q9Y5X5 522 aa10.09□□□□□ -0.79
USP49-204ENST00000423567 MYO1GB0I1T2 1018 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 LSM1O15116 133 aaKnown RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 ACOX3O15254 700 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 HS6ST1O60243 411 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 CDC40O60508 579 aaKnown RBP eCLIP10.08□□□□□ -0.8
USP49-204ENST00000423567 PEX11AO75192 247 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 COQ9O75208 318 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 SKAP2O75563 359 aaPredicted RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 CBX7O95931 251 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 JUNP05412 331 aaKnown RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 NAGAP17050 411 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 RPL3P39023 403 aaKnown RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 DNASE1L1P49184 302 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 ABCE1P61221 599 aaKnown RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 PLCXD2Q0VAA5 305 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 MAD2L1Q13257 205 aaPredicted RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 NTRK2Q16620 822 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 UGT3A2Q3SY77 523 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 RFTN2Q52LD8 501 aaPredicted RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 RNFT1Q5M7Z0 435 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 TBCELQ5QJ74 424 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 C1QL3Q5VWW1 255 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 MTFR2Q6P444 385 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 LYPD8Q6UX82 237 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 R3HCC1LQ7Z5L2 792 aaKnown RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 FJX1Q86VR8 437 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms