RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 MKKSQ9NPJ1 570 aaPredicted RBP4.5□□□□□ -1.69
SFXN1-202ENST00000421887 HEYLQ9NQ87 328 aaPredicted RBP4.5□□□□□ -1.69
SFXN1-202ENST00000421887 YAE1D1Q9NRH1 226 aa4.5□□□□□ -1.69
SFXN1-202ENST00000421887 PARVAQ9NVD7 372 aa4.5□□□□□ -1.69
SFXN1-202ENST00000421887 ALKBH4Q9NXW9 302 aa4.5□□□□□ -1.69
SFXN1-202ENST00000421887 POLG2Q9UHN1 485 aa4.5□□□□□ -1.69
SFXN1-202ENST00000421887 MID2Q9UJV3 735 aa4.5□□□□□ -1.69
SFXN1-202ENST00000421887 EIF3LQ9Y262 564 aaKnown RBP4.5□□□□□ -1.69
SFXN1-202ENST00000421887 ASF1AQ9Y294 204 aa4.5□□□□□ -1.69
SFXN1-202ENST00000421887 FAM169AQ9Y6X4 670 aa4.5□□□□□ -1.69
SFXN1-202ENST00000421887 IGLV3-12A0A075B6K2 115 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 A0A087WWL8 130 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 LOC102723996A0A087X1L8 192 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 A6NLC8 198 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 HSPB2A8KAH6 182 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 NDC80O14777 642 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 WDR1O75083 606 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 NEURL1O76050 574 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 FAM157CP0CG43 387 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 TPH1P17752 444 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 GABRB3P28472 473 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 RFC3P40938 356 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 ASCL1P50553 236 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 UCP3P55916 312 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 PLGLB1Q02325 96 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 ACTN3Q08043 901 aaPredicted RBP4.49□□□□□ -1.69
SFXN1-202ENST00000421887 NIPAL4Q0D2K0 466 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 PTP4A2Q12974 167 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 SLC29A2Q14542 456 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 IHHQ14623 411 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 HSPB2Q16082 182 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 DPYSL2Q16555 572 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 KRTAP24-1Q3LI83 254 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 BCL7AQ4VC05 210 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 BOLA3Q53S33 107 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 H3F3CQ6NXT2 135 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 MON1BQ7L1V2 547 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 GLT6D1Q7Z4J2 308 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 CPEB2Q7Z5Q1 589 aaKnown RBP4.49□□□□□ -1.69
SFXN1-202ENST00000421887 ZNF329Q86UD4 541 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 PCYOX1LQ8NBM8 494 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 DTX3LQ8TDB6 740 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 MMABQ96EY8 250 aaPredicted RBP4.49□□□□□ -1.69
SFXN1-202ENST00000421887 LINC00615Q96LM1 132 aaPredicted RBP4.49□□□□□ -1.69
SFXN1-202ENST00000421887 IMMP1LQ96LU5 166 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 ZNF830Q96NB3 372 aaPredicted RBP4.49□□□□□ -1.69
SFXN1-202ENST00000421887 PEBP4Q96S96 227 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 NRTNQ99748 197 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 PLA2G12AQ9BZM1 189 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 MS4A7Q9GZW8 240 aaPredicted RBP4.49□□□□□ -1.69
SFXN1-202ENST00000421887 DEFB127Q9H1M4 99 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 GOLPH3LQ9H4A5 285 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 TRABDQ9H4I3 376 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 EXO5Q9H790 373 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 COG4Q9H9E3 785 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 SEPSECSQ9HD40 501 aaKnown RBP4.49□□□□□ -1.69
SFXN1-202ENST00000421887 PNPLA3Q9NST1 481 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.49□□□□□ -1.69
SFXN1-202ENST00000421887 ETNK2Q9NVF9 386 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 SPHK1Q9NYA1 384 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 ACAD8Q9UKU7 415 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 KLHL20Q9Y2M5 609 aa4.49□□□□□ -1.69
SFXN1-202ENST00000421887 HEATR5AQ86XA9 2040 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 IGHV3-20A0A0C4DH32 117 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 A0A0G2JK05 382 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 IGLV5-39A0A0G2JS06 123 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 A0A0J9YVX5 310 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 MBD3L5A6NJ08 208 aaPredicted RBP4.48□□□□□ -1.69
SFXN1-202ENST00000421887 A8MV72 311 aaPredicted RBP4.48□□□□□ -1.69
SFXN1-202ENST00000421887 RAB27BO00194 218 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 STATHP02808 62 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 ATP1B2P14415 290 aaPredicted RBP4.48□□□□□ -1.69
SFXN1-202ENST00000421887 GABRA1P14867 456 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 CHRNB2P17787 502 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 PRLHRP49683 370 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 AGTR2P50052 363 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 EFNA3P52797 238 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 OGDHQ02218 1023 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 GALNT2Q10471 571 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 RPA4Q13156 261 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 IQCB1Q15051 598 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 CYP1B1Q16678 543 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 CMPK2Q5EBM0 449 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 C1orf185Q5T7R7 199 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 WLSQ5T9L3 541 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 LIN54Q6MZP7 749 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 PPP1R2P3Q6NXS1 205 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 FIGLAQ6QHK4 219 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 TMEM205Q6UW68 189 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 TBC1D1Q86TI0 1168 aaPredicted RBP4.48□□□□□ -1.69
SFXN1-202ENST00000421887 RPS19BP1Q86WX3 136 aaKnown RBP4.48□□□□□ -1.69
SFXN1-202ENST00000421887 TBC1D21Q8IYX1 336 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 OR5AR1Q8NGP9 310 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 LINC01560Q8TB33 94 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 M1APQ8TC57 530 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 NAT14Q8WUY8 206 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 HEXDCQ8WVB3 486 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 SMPDL3BQ92485 455 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 SLCO2A1Q92959 643 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms