RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 DVL2O14641 736 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 ATP1B1P05026 303 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 KRT15P19012 456 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 S1PR1P21453 382 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 CEACAM8P31997 349 aaPredicted RBP15.89■□□□□ 0.13
MSH6-203ENST00000420813 TIMP3P35625 211 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 CASP3P42574 277 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 MASP1P48740 699 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 MAP4K2Q12851 820 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 PRICKLE4Q2TBC4 344 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 FBXL19-AS1Q494R0 122 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 NHSL2Q5HYW2 709 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 BICRALQ6AI39 1079 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 VASNQ6EMK4 673 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 MMGT1Q8N4V1 131 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 ZNF483Q8TF39 744 aaPredicted RBP15.89■□□□□ 0.13
MSH6-203ENST00000420813 TRIM44Q96DX7 344 aaPredicted RBP15.89■□□□□ 0.13
MSH6-203ENST00000420813 LRRC46Q96FV0 321 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 FMO2Q99518 471 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 NXF5Q9H1B4 397 aaKnown RBP15.89■□□□□ 0.13
MSH6-203ENST00000420813 NMRK1Q9NWW6 199 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 PSME2Q9UL46 239 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 SNX6Q9UNH7 406 aa15.89■□□□□ 0.13
MSH6-203ENST00000420813 SYT5O00445 386 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 CTAG2O75638 210 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 PPM1BO75688 479 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 TRAPPC6AO75865 159 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 ABCB1P08183 1280 aaPredicted RBP15.88■□□□□ 0.13
MSH6-203ENST00000420813 CSNK2A2P19784 350 aaPredicted RBP15.88■□□□□ 0.13
MSH6-203ENST00000420813 DNAJA1P31689 397 aaKnown RBP15.88■□□□□ 0.13
MSH6-203ENST00000420813 ASCL1P50553 236 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 MGAT2Q10469 447 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 GALNT1Q10472 559 aaPredicted RBP15.88■□□□□ 0.13
MSH6-203ENST00000420813 LETMD1Q6P1Q0 360 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 RELL2Q8NC24 303 aaPredicted RBP15.88■□□□□ 0.13
MSH6-203ENST00000420813 DCAKDQ8WVC6 231 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 SELENOMQ8WWX9 145 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 HSPBAP1Q96EW2 488 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 GNRHR2Q96P88 292 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 FARSBQ9NSD9 589 aaKnown RBP15.88■□□□□ 0.13
MSH6-203ENST00000420813 MAT2BQ9NZL9 334 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 ZNF629Q9UEG4 869 aaPredicted RBP15.88■□□□□ 0.13
MSH6-203ENST00000420813 FETUBQ9UGM5 382 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 TRPS1Q9UHF7 1281 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 DMGDHQ9UI17 866 aaKnown RBP15.88■□□□□ 0.13
MSH6-203ENST00000420813 ZNF639Q9UID6 485 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 DTX4Q9Y2E6 619 aa15.88■□□□□ 0.13
MSH6-203ENST00000420813 A0A1B0GTL3 188 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 A8MT66 165 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 TRIM49D1C9J1S8 452 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 ACOX3O15254 700 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 URI1O94763 535 aaPredicted RBP15.87■□□□□ 0.13
MSH6-203ENST00000420813 PDYNP01213 254 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 IL2RAP01589 272 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 RHOXF2BP0C7M4 288 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 KIR2DL3P43628 341 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 ART1P52961 327 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 TRA2BP62995 288 aaKnown RBP15.87■□□□□ 0.13
MSH6-203ENST00000420813 SGO1Q5FBB7 561 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 NSUN5P2Q63ZY6 315 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 TIGD3Q6B0B8 471 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 NUP54Q7Z3B4 507 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 ZZZ3Q8IYH5 903 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 PRR22Q8IZ63 422 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 TMEM151AQ8N4L1 468 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 NAXEQ8NCW5 288 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 TNIP2Q8NFZ5 429 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 NINJ1Q92982 152 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 RNASE6Q93091 150 aaKnown RBP15.87■□□□□ 0.13
MSH6-203ENST00000420813 TM4SF18Q96CE8 201 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 CTHRC1Q96CG8 243 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 LCORQ96JN0 433 aaPredicted RBP15.87■□□□□ 0.13
MSH6-203ENST00000420813 SH3GL2Q99962 352 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 FAIM2Q9BWQ8 316 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 BRINP2Q9C0B6 783 aa15.87■□□□□ 0.13
MSH6-203ENST00000420813 DNAJB12Q9NXW2 375 aaKnown RBP15.87■□□□□ 0.13
MSH6-203ENST00000420813 FOXD3Q9UJU5 478 aaPredicted RBP15.87■□□□□ 0.13
MSH6-203ENST00000420813 PRRC2AP48634 2157 aaKnown RBP15.87■□□□□ 0.13
MSH6-203ENST00000420813 MED12LQ86YW9 2145 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 ABCA4P78363 2273 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 A0A087WUV0 522 aaPredicted RBP15.86■□□□□ 0.13
MSH6-203ENST00000420813 FAM221AA4D161 298 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 CD8B2A6NJW9 211 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 POC1B-GALNT4F8VUJ3 575 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 PPP6CO00743 305 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 ERAL1O75616 437 aaKnown RBP15.86■□□□□ 0.13
MSH6-203ENST00000420813 SBK3P0C264 359 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 HSD3B1P14060 373 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 BMP5P22003 454 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 HSD3B2P26439 372 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 PTPN6P29350 595 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 ECHS1P30084 290 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 UQCRC1P31930 480 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 FEN1P39748 380 aaKnown RBP15.86■□□□□ 0.13
MSH6-203ENST00000420813 CDH13P55290 713 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 DCAF7P61962 342 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 SNTA1Q13424 505 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 SLC30A6Q6NXT4 461 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 FAM111BQ6SJ93 734 aa15.86■□□□□ 0.13
MSH6-203ENST00000420813 RPS27LQ71UM5 84 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms