RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 FAM58BPP0C7Q3 252 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 CYP4B1P13584 511 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 LOXP28300 417 aaPredicted RBP12.93□□□□□ -0.34
NFE4-201ENST00000420058 BUD31P41223 144 aaPredicted RBP12.93□□□□□ -0.34
NFE4-201ENST00000420058 MASP1P48740 699 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 STARP49675 285 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 GFRA1P56159 465 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 FAM27E3Q08E93 113 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 MGAT2Q10469 447 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 DDX39BQ13838 428 aaKnown RBP12.93□□□□□ -0.34
NFE4-201ENST00000420058 TOMM20Q15388 145 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 TMEM81Q6P7N7 255 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 C22orf34Q6ZV56 151 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 CXXC5Q7LFL8 322 aaKnown RBP12.93□□□□□ -0.34
NFE4-201ENST00000420058 P3H2Q8IVL5 708 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 TRIM42Q8IWZ5 723 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 SLC35F6Q8N357 371 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 SIMC1Q8NDZ2 872 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 UBTD2Q8WUN7 234 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 ALG9Q9H6U8 611 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 NSMCE4AQ9NXX6 385 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 ADGRE2Q9UHX3 823 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 RNF112Q9ULX5 631 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 SNX12Q9UMY4 172 aa12.93□□□□□ -0.34
NFE4-201ENST00000420058 B4DXG7 233 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 K7EPI3 171 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 UBXN8O00124 270 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 CASKO14936 926 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 SNPHO15079 494 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 SMPD2O60906 423 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 ICOSLGO75144 302 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 TGM6O95932 706 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 GBAP04062 536 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 NR2F6P10588 404 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 GPX3P22352 226 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 PTX3P26022 381 aaPredicted RBP12.92□□□□□ -0.34
NFE4-201ENST00000420058 SSTR1P30872 391 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 LHX2P50458 406 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 RAP1GDS1P52306 607 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 SLC12A2P55011 1212 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 SRYQ05066 204 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 RCAN2Q14206 197 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 SETDB1Q15047 1291 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 ACKR1Q16570 336 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 ANGPTL8Q6UXH0 198 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 YTHDF3Q7Z739 585 aaKnown RBP12.92□□□□□ -0.34
NFE4-201ENST00000420058 GCNT2Q8N0V5 402 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 C17orf47Q8NEP4 570 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 OR1J4Q8NGS1 313 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 IGFBPL1Q8WX77 278 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 EXT2Q93063 718 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 PIGTQ969N2 578 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 ZFP3Q96NJ6 502 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 TM9SF2Q99805 663 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 OR2B2Q9GZK3 357 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 GALNT9Q9HCQ5 603 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 SERHLQ9NQF3 203 aa12.92□□□□□ -0.34
NFE4-201ENST00000420058 LYARQ9NX58 379 aaKnown RBP12.92□□□□□ -0.34
NFE4-201ENST00000420058 EXO1Q9UQ84 846 aaKnown RBP12.92□□□□□ -0.34
NFE4-201ENST00000420058 LRRC14BA6NHZ5 514 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 GOLGA6L6A8MZA4 724 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 PPM1BO75688 479 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 STMN1P16949 149 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 NAGAP17050 411 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 MC3RP41968 323 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 PCYT1AP49585 367 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 NEK2P51955 445 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 CUL3Q13618 768 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 CAPRIN1Q14444 709 aaKnown RBP12.91□□□□□ -0.34
NFE4-201ENST00000420058 ZNF474Q6S9Z5 364 aaPredicted RBP12.91□□□□□ -0.34
NFE4-201ENST00000420058 NUP54Q7Z3B4 507 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 GALNT12Q8IXK2 581 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 TEX9Q8N6V9 391 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 STAG3L4Q8TBR4 150 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 WDR20Q8TBZ3 569 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 STARD4Q96DR4 205 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 TSPAN17Q96FV3 270 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 HS3ST6Q96QI5 342 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 RBBP8Q99708 897 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 PIGQQ9BRB3 760 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 BDH2Q9BUT1 245 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 PIGMQ9H3S5 423 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 PSD3Q9NYI0 1048 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 NUDT4Q9NZJ9 180 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 OPTCQ9UBM4 332 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 NDRG3Q9UGV2 375 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 TRPS1Q9UHF7 1281 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 ZNF639Q9UID6 485 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 CES1P1Q9UKY3 287 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 EIF3LQ9Y262 564 aaKnown RBP12.91□□□□□ -0.34
NFE4-201ENST00000420058 HEATR5AQ86XA9 2040 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 ABCA1O95477 2261 aa12.91□□□□□ -0.34
NFE4-201ENST00000420058 A0A1W2PNV4 684 aa12.9□□□□□ -0.34
NFE4-201ENST00000420058 H0YIV9 168 aa12.9□□□□□ -0.34
NFE4-201ENST00000420058 PLOD2O00469 737 aa12.9□□□□□ -0.34
NFE4-201ENST00000420058 HCRTR2O43614 444 aa12.9□□□□□ -0.34
NFE4-201ENST00000420058 UGT2B11O75310 529 aa12.9□□□□□ -0.34
NFE4-201ENST00000420058 CBR3O75828 277 aa12.9□□□□□ -0.34
NFE4-201ENST00000420058 EPB42P16452 691 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms