RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 PDK2Q15119 407 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 TAB1Q15750 504 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 MAPK11Q15759 364 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 MTHFSDQ2M296 383 aaKnown RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 PCGF3Q3KNV8 242 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 ASPRV1Q53RT3 343 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 MDH1BQ5I0G3 518 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 RBM48Q5RL73 367 aaKnown RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 CCNYL2Q5T2Q4 361 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 MPP7Q5T2T1 576 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 FAM72AQ5TYM5 149 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 TIGD3Q6B0B8 471 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 FAM72DQ6L9T8 149 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 USP50Q70EL3 339 aaPredicted RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 BTN2A1Q7KYR7 527 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 DSG4Q86SJ6 1040 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 LINC00523Q86TU6 105 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 CCDC190Q86UF4 302 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 NFE4Q86UQ8 179 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 FAM72BQ86X60 149 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 EPHX4Q8IUS5 362 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZC3H3Q8IXZ2 948 aaKnown RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 PGAM4Q8N0Y7 254 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 SCML4Q8N228 414 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 CADM2Q8N3J6 435 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 SPEM1Q8N4L4 309 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 XXYLT1Q8NBI6 393 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 KIAA0895Q8NCT3 520 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 OR5T2Q8NGG2 359 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 OR6Q1Q8NGQ2 317 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 OR6F1Q8NGZ6 308 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 OR8K3Q8NH51 312 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZFAND1Q8TCF1 268 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 UTP15Q8TED0 518 aaKnown RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 UFD1Q92890 307 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 TESCQ96BS2 214 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 HDAC11Q96DB2 347 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 TMCO6Q96DC7 493 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 ASB9Q96DX5 294 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 ERLEC1Q96DZ1 483 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 DUS3LQ96G46 650 aaKnown RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 BTN2A3PQ96KV6 586 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 GLT1D1Q96MS3 346 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 PKP2Q99959 881 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 SEMA3CQ99985 751 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 MTG1Q9BT17 334 aaPredicted RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 C9orf16Q9BUW7 83 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 MLPHQ9BV36 600 aaPredicted RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 C1QTNF1Q9BXJ1 281 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 NUSAP1Q9BXS6 441 aaKnown RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 RAB34Q9BZG1 259 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 UPF3AQ9H1J1 476 aaKnown RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 MMP28Q9H239 520 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 TRIM45Q9H8W5 580 aaPredicted RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 COPS7BQ9H9Q2 264 aaPredicted RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 CAB39LQ9H9S4 337 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 NTN4Q9HB63 628 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 LRRC4Q9HBW1 653 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 IFT46Q9NQC8 304 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 SH3GLB2Q9NR46 395 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 EIF2B3Q9NR50 452 aaKnown RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 PAK1IP1Q9NWT1 392 aaPredicted RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 TEKT2Q9UIF3 430 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 DIMT1Q9UNQ2 313 aaKnown RBP3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 RIPK3Q9Y572 518 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 ASB4Q9Y574 426 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 SNX5Q9Y5X3 404 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 ALG6Q9Y672 507 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 PIAS3Q9Y6X2 628 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 MYH2Q9UKX2 1941 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 LRP6O75581 1613 aa3.14□□□□□ -1.91
SDCBPP3-201ENST00000419629 CNTNAP1P78357 1384 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 TIAM2Q8IVF5 1701 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 A0A1B0GUL6 1792 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 A0A1B0GVY2 172 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 PGPEP1LA6NFU8 196 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 TUBAL3A6NHL2 446 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 LEUTXA8MZ59 168 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 FAM90A26D6RGX4 464 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 LOC110117498-PIK3R3F6TDL0 507 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 F8W036 122 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 GOLGA8SH3BPF8 625 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 H3BQ06 376 aaPredicted RBP3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 P2RY10O00398 339 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 CTDSP2O14595 271 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 OGG1O15527 345 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 PAPSS1O43252 624 aaPredicted RBP3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 PSTPIP1O43586 416 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 HS6ST1O60243 411 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 GMDSO60547 372 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZNF780AO75290 641 aaPredicted RBP3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 UGT2B11O75310 529 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 CIAO1O76071 339 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 GABARAPO95166 117 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 SEC24AO95486 1093 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 LDOC1O95751 146 aaPredicted RBP3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 LDLRP01130 860 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 PRSS1P07477 247 aa3.13□□□□□ -1.91
SDCBPP3-201ENST00000419629 SRPRAP08240 638 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms