RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SEPHS2Q99611 448 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 TACO1Q9BSH4 297 aaKnown RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 YIPF2Q9BWQ6 316 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ACTRT3Q9BYD9 372 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 SPRTNQ9H040 489 aaPredicted RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 OR51I1Q9H343 314 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 EPS8L2Q9H6S3 715 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 GORASP2Q9H8Y8 452 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF304Q9HCX3 659 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ADAP2Q9NPF8 381 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 C8orf4Q9NR00 106 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 SEMA4GQ9NTN9 838 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 CCM2LQ9NUG4 571 aaPredicted RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 EXD2Q9NVH0 621 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 ARMC1Q9NVT9 282 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 KCMF1Q9P0J7 381 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 PDP2Q9P2J9 529 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 DHCR7Q9UBM7 475 aaKnown RBP5.59□□□□□ -1.51
HMGB3-202ENST00000419110 RIMS3Q9UJD0 308 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 BAG5Q9UL15 447 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 USP22Q9UPT9 525 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 LAMA1P25391 3075 aa5.59□□□□□ -1.51
HMGB3-202ENST00000419110 PTPRBP23467 1997 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 SDK2Q58EX2 2172 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 TTC36A6NLP5 189 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 DUXAA6NLW8 204 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 H3BMH7 237 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 PLOD2O00469 737 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 HMGN4O00479 90 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CASQ2O14958 399 aaPredicted RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 SUV39H1O43463 412 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 HYAL3O43820 417 aaPredicted RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 PLOD3O60568 738 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CTNSO60931 367 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 E2F6O75461 281 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 TIPRLO75663 272 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 KCNK5O95279 499 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 MED26O95402 600 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 IFNA16P05015 189 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 HMGN2P05204 90 aaKnown RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 FABP3P05413 133 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CYC1P08574 325 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 ALOX5P09917 674 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 SLC35E2P0CK97 266 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 NR2F1P10589 423 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 MATN1P21941 496 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 ALAS2P22557 587 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 PTGER1P34995 402 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 STT3AP46977 705 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 OR1D4P47884 311 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 HSPA13P48723 471 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 GZMMP51124 257 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 MVDP53602 400 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 PRKAG1P54619 331 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 MRPS35P82673 323 aaKnown RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 E2F1Q01094 437 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 OCA2Q04671 838 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 DUSP2Q05923 314 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 BIKQ13323 160 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 IL11RAQ14626 422 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 C16orf72Q14CZ0 275 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 ATP6AP1Q15904 470 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF750Q32MQ0 723 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 GPAT3Q53EU6 434 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 IFI44LQ53G44 452 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CYBRD1Q53TN4 286 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CCDC157Q569K6 752 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 C1orf189Q5VU69 101 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 PRAMEF8Q5VWM4 474 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 PRAMEF7Q5VXH5 474 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 REEP3Q6NUK4 255 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 MFSD12Q6NUT3 480 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CDC73Q6P1J9 531 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 ZCCHC12Q6PEW1 402 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 IZUMO2Q6UXV1 221 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 VASH1Q7L8A9 365 aaPredicted RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 TMPRSS9Q7Z410 1059 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 B3GNT8Q7Z7M8 397 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 SLC44A2Q8IWA5 706 aaPredicted RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 ZC3H7AQ8IWR0 971 aaKnown RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 C10orf111Q8N326 155 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 OR2L13Q8N349 312 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 HORMAD2Q8N7B1 307 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CDRT4Q8N9R6 151 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 SUMF1Q8NBK3 374 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 TMEM52Q8NDY8 209 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 PRSS33Q8NF86 280 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 ADCY4Q8NFM4 1077 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 OR7G2Q8NG99 324 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 OR5D16Q8NGK9 328 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 OR14A16Q8NHC5 309 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 ADAMTS15Q8TE58 950 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 CANT1Q8WVQ1 401 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 KAT2AQ92830 837 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 ATOH1Q92858 354 aaPredicted RBP5.58□□□□□ -1.52
HMGB3-202ENST00000419110 RIT1Q92963 219 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 MAL2Q969L2 176 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 ELP4Q96EB1 424 aa5.58□□□□□ -1.52
HMGB3-202ENST00000419110 TMEM19Q96HH6 336 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms