RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 C18orf63Q68DL7 685 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 ZNF793Q6ZN11 406 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 VRK2Q86Y07 508 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 OR52I1Q8NGK6 324 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 GANCQ8TET4 914 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 TRIM43Q96BQ3 446 aaPredicted RBP11.23□□□□□ -0.61
LIMK1-202ENST00000418310 AGAP4Q96P64 663 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 NXF2Q9GZY0 626 aaKnown RBP11.23□□□□□ -0.61
LIMK1-202ENST00000418310 CNOT2Q9NZN8 540 aaKnown RBP11.23□□□□□ -0.61
LIMK1-202ENST00000418310 P2RX2Q9UBL9 471 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 NUFIP1Q9UHK0 495 aaKnown RBP11.23□□□□□ -0.61
LIMK1-202ENST00000418310 A4GNTQ9UNA3 340 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 MGAT4BQ9UQ53 548 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 RPL36Q9Y3U8 105 aaKnown RBP11.23□□□□□ -0.61
LIMK1-202ENST00000418310 SH3D21A4FU49 640 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 FABP12A6NFH5 140 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 FAM183AA6NL82 134 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 PAPLNO95428 1278 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 MYL12AP19105 171 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 PPP2R1BP30154 601 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 GPR4P46093 362 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 CCR8P51685 355 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 TAS2R41P59536 307 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 ZNF791Q3KP31 576 aaPredicted RBP11.23□□□□□ -0.61
LIMK1-202ENST00000418310 SYT14P1Q58G82 188 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 PDZK1Q5T2W1 519 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 SLX4IPQ5VYV7 408 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 RRM2BQ7LG56 351 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 LINC01555Q8NAE3 123 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 OR4F15Q8NGB8 312 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 OR8J1Q8NGP2 316 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 PAWRQ96IZ0 340 aaKnown RBP11.23□□□□□ -0.61
LIMK1-202ENST00000418310 FYTTD1Q96QD9 318 aaKnown RBP11.23□□□□□ -0.61
LIMK1-202ENST00000418310 CERS4Q9HA82 394 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 FZD3Q9NPG1 666 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 TXNL4BQ9NX01 149 aaKnown RBP11.23□□□□□ -0.61
LIMK1-202ENST00000418310 N6AMT1Q9Y5N5 214 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 DENND4CQ5VZ89 1909 aa11.23□□□□□ -0.61
LIMK1-202ENST00000418310 GSAPA4D1B5 854 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 FAAHO00519 579 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 MPZL2O60487 215 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 SRPRAP08240 638 aaKnown RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 GJA8P48165 433 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 RFX3P48380 749 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 ILKQ13418 452 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 LTB4RQ15722 352 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 FLYWCH1Q4VC44 716 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 PDZD3Q86UT5 571 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 ZFPM2Q8WW38 1151 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 TM9SF4Q92544 642 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 PIK3R3Q92569 461 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 DCLRE1CQ96SD1 692 aaKnown RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 TAPBPLQ9BX59 468 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 SLC25A19Q9HC21 320 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 MBNL1Q9NR56 388 aaKnown RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 DEC1Q9P2X7 70 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 ENOPH1Q9UHY7 261 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 SLC13A4Q9UKG4 626 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 STUB1Q9UNE7 303 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 GPR55Q9Y2T6 319 aaPredicted RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 ALPK3Q96L96 1907 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 C2orf92A0A1B0GVN3 265 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 C4orf51C9J302 202 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 DVL2O14641 736 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 TIE1P35590 1138 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 GIPRP48546 466 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 PXNP49023 591 aaPredicted RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 MAN2A2P49641 1150 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 CAMK1Q14012 370 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 MFSD4BQ5TF39 518 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 FAM46CQ5VWP2 391 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 PAMR1Q6UXH9 720 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 UBE3DQ7Z6J8 389 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 KRT73Q86Y46 540 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 TMEM145Q8NBT3 493 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 APOBEC4Q8WW27 367 aaKnown RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 RNFT2Q96EX2 444 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 C6orf106Q9H6K1 298 aaPredicted RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 NEUROD4Q9HD90 331 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 KCND3Q9UK17 655 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 CMAHPQ9Y471 501 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 V9GYH0 126 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 CASKO14936 926 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 PCSK2P16519 638 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 CERS1P27544 350 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 P2RY2P41231 377 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 RFX2P48378 723 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 LARS2Q15031 903 aaKnown RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 ZFP69Q49AA0 526 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 ZNF658BQ4V348 819 aaPredicted RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 SMARCD3Q6STE5 483 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 LAPTM4BQ86VI4 370 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 SLC30A8Q8IWU4 369 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 OR4N5Q8IXE1 308 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 SIMC1Q8NDZ2 872 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 ZNF582Q96NG8 517 aaPredicted RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 CTRCQ99895 268 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 TTTY10Q9BZA0 68 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 NDEL1Q9GZM8 345 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 PAK6Q9NQU5 681 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms