RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 SNX15Q9NRS6 342 aa6.4□□□□□ -1.38
COPS3-202ENST00000417352 GRHL1Q9NZI5 618 aa6.4□□□□□ -1.38
COPS3-202ENST00000417352 EHD3Q9NZN3 535 aa6.4□□□□□ -1.38
COPS3-202ENST00000417352 KLRF1Q9NZS2 232 aa6.4□□□□□ -1.38
COPS3-202ENST00000417352 CRIM1Q9NZV1 1036 aa6.4□□□□□ -1.38
COPS3-202ENST00000417352 MTRF1LQ9UGC7 380 aaKnown RBP6.4□□□□□ -1.38
COPS3-202ENST00000417352 SLC12A4Q9UP95 1085 aa6.4□□□□□ -1.38
COPS3-202ENST00000417352 PLEKHA6Q9Y2H5 1048 aa6.4□□□□□ -1.38
COPS3-202ENST00000417352 TNPO3Q9Y5L0 923 aaKnown RBP6.4□□□□□ -1.38
COPS3-202ENST00000417352 NPFFR2Q9Y5X5 522 aa6.4□□□□□ -1.38
COPS3-202ENST00000417352 CHCHD2Q9Y6H1 151 aaPredicted RBP6.4□□□□□ -1.38
COPS3-202ENST00000417352 SETD2Q9BYW2 2564 aaPredicted RBP6.4□□□□□ -1.39
COPS3-202ENST00000417352 HIVEP1P15822 2718 aa6.4□□□□□ -1.39
COPS3-202ENST00000417352 A0A1W2PS29 197 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 GOLGA6L10A6NI86 522 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 OR6C76A6NM76 312 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 AHRRA9YTQ3 701 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 POC1B-GALNT4F8VUJ3 575 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 H0YIV9 168 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 CTAG2O75638 210 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 KLHL2O95198 593 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 SNX4O95219 450 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 WISP3O95389 354 aaPredicted RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 C1QAP02745 245 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 IGKV3-11P04433 115 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 PORP16435 677 aaPredicted RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 TSPAN8P19075 237 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 ENDOUP21128 410 aaKnown RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 TACR1P25103 407 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 BSGP35613 385 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 FEN1P39748 380 aaKnown RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 SERPINB8P50452 374 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 GUCY2DQ02846 1103 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 NAB1Q13506 487 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 CUL3Q13618 768 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 KEAP1Q14145 624 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 RCAN2Q14206 197 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 EXOSC7Q15024 291 aaKnown RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 EBPQ15125 230 aaKnown RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 RPS6KA2Q15349 733 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 HYAL4Q2M3T9 481 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 EIPR1Q53HC9 387 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 TBCELQ5QJ74 424 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 RIPPLY2Q5TAB7 128 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 C8orf74Q6P047 294 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 FAM180BQ6P0A1 224 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 ANGPTL8Q6UXH0 198 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 SYT10Q6XYQ8 523 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 CYS1Q717R9 158 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 PAGE2Q7Z2X7 111 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 MILR1Q7Z6M3 343 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 YRDCQ86U90 279 aaKnown RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 PM20D2Q8IYS1 436 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 C17orf53Q8N3J3 647 aaPredicted RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 RHEBL1Q8TAI7 183 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 UHMK1Q8TAS1 419 aaKnown RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 LINC01560Q8TB33 94 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 UBTD2Q8WUN7 234 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 ABTB1Q969K4 478 aaPredicted RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 KLHL29Q96CT2 875 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 HSPBAP1Q96EW2 488 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 TIMP4Q99727 224 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 DDX31Q9H8H2 851 aaKnown RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 NOP53Q9NZM5 478 aaKnown RBP6.39□□□□□ -1.39
COPS3-202ENST00000417352 SENP1Q9P0U3 644 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 MAPRE3Q9UPY8 281 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 L3MBTL1Q9Y468 752 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 ASB4Q9Y574 426 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 ZNF780BQ9Y6R6 833 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 C2CD3Q4AC94 2353 aa6.39□□□□□ -1.39
COPS3-202ENST00000417352 UQCRHLA0A096LP55 91 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 A0A0A6YYD5 115 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 GNG14A0A1W2PPG7 69 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 LRRC3CA6NJW4 275 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 A6NNC1 897 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 KDM4EB2RXH2 506 aaPredicted RBP6.38□□□□□ -1.39
COPS3-202ENST00000417352 H0Y3Z8 333 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 FOXE1O00358 373 aaPredicted RBP6.38□□□□□ -1.39
COPS3-202ENST00000417352 SYT5O00445 386 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 CASKO14936 926 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 GUCY1B2O75343 617 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 ERN1O75460 977 aaKnown RBP6.38□□□□□ -1.39
COPS3-202ENST00000417352 REM1O75628 298 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 SCELO95171 688 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 EPPINO95925 133 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 INHBAP08476 426 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 RBP1P09455 135 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 CT62P0C5K7 136 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 CYP4B1P13584 511 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 MTHFD2P13995 350 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 CPMP14384 443 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 IGFBP2P18065 325 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 BMP7P18075 431 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 KLK2P20151 261 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 KRT20P35900 424 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 CASP3P42574 277 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 ASCL1P50553 236 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 IGLV3-21P80748 117 aaPredicted RBP6.38□□□□□ -1.39
COPS3-202ENST00000417352 PLCXD2Q0VAA5 305 aa6.38□□□□□ -1.39
COPS3-202ENST00000417352 POU4F3Q15319 338 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms