RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 IKZF5Q9H5V7 419 aa12.37□□□□□ -0.43
CNN3-203ENST00000415017 GPN2Q9H9Y4 310 aaPredicted RBP12.37□□□□□ -0.43
CNN3-203ENST00000415017 TPT1P8Q9HAU6 139 aa12.37□□□□□ -0.43
CNN3-203ENST00000415017 PNO1Q9NRX1 252 aaKnown RBP12.37□□□□□ -0.43
CNN3-203ENST00000415017 ZNF223Q9UK11 482 aaPredicted RBP12.37□□□□□ -0.43
CNN3-203ENST00000415017 MRPS18BQ9Y676 258 aaKnown RBP12.37□□□□□ -0.43
CNN3-203ENST00000415017 ANKRD11Q6UB99 2663 aaPredicted RBP12.36□□□□□ -0.43
CNN3-203ENST00000415017 CHD8Q9HCK8 2581 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 IGF2RP11717 2491 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 CPAMD8Q8IZJ3 1885 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 IGHV3-20A0A0C4DH32 117 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 RRP9O43818 475 aaKnown RBP12.36□□□□□ -0.43
CNN3-203ENST00000415017 NT5EP21589 574 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 NUDT2P50583 147 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 SLC26A5P58743 744 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 PRR5P85299 388 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 C6orf10Q5SRN2 563 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 PLAG1Q6DJT9 500 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 FAAH2Q6GMR7 532 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 MFSD12Q6NUT3 480 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 ZCCHC12Q6PEW1 402 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 PAPD4Q6PIY7 484 aaKnown RBP12.36□□□□□ -0.43
CNN3-203ENST00000415017 ZNF621Q6ZSS3 439 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 ASRGL1Q7L266 308 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 NDUFAF7Q7L592 441 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 ERMP1Q7Z2K6 904 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 C6orf120Q7Z4R8 191 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 MRGPREQ86SM8 312 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 SLC15A3Q8IY34 581 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 C10orf111Q8N326 155 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 OR56A1Q8NGH5 318 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 OR8K3Q8NH51 312 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 M1APQ8TC57 530 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 TMEM125Q96AQ2 219 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 KIAA1143Q96AT1 154 aaPredicted RBP12.36□□□□□ -0.43
CNN3-203ENST00000415017 C8orf44Q96CB5 159 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 AURKBQ96GD4 344 aaPredicted RBP12.36□□□□□ -0.43
CNN3-203ENST00000415017 ART5Q96L15 291 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 VSTM2LQ96N03 204 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 LPAR4Q99677 370 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 SLC35A5Q9BS91 424 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 NUDT9Q9BW91 350 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 KAT8Q9H7Z6 458 aaKnown RBP12.36□□□□□ -0.43
CNN3-203ENST00000415017 ANKRA2Q9H9E1 313 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 C3orf14Q9HBI5 128 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 GIN1Q9NXP7 522 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 NDE1Q9NXR1 346 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 TMEM181Q9P2C4 612 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 ANGPTL2Q9UKU9 493 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 CLCA3PQ9Y6N3 262 aa12.36□□□□□ -0.43
CNN3-203ENST00000415017 C15orf38-AP3S2A0A0A6YYH1 394 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 RNF103-CHMP3A0A140T963 221 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 OR6C76A6NM76 312 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 CLIC1O00299 241 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 TNFRSF21O75509 655 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 HPP00738 406 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 IFNA16P05015 189 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 ATXN8OSP0DMR3 200 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 PPIBP23284 216 aaKnown RBP12.35□□□□□ -0.43
CNN3-203ENST00000415017 SSTR4P31391 388 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 GPC1P35052 558 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 EIF2S3P41091 472 aaKnown RBP12.35□□□□□ -0.43
CNN3-203ENST00000415017 SOX8P57073 446 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 PSME3P61289 254 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 NCALDP61601 193 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 TXNL4AP83876 142 aaKnown RBP12.35□□□□□ -0.43
CNN3-203ENST00000415017 SLC25A3Q00325 362 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 SELPLGQ14242 412 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 CAPRIN1Q14444 709 aaKnown RBP12.35□□□□□ -0.43
CNN3-203ENST00000415017 ZNF267Q14586 743 aaPredicted RBP12.35□□□□□ -0.43
CNN3-203ENST00000415017 FXNQ16595 210 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 ZSCAN26Q16670 478 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 SPATS1Q496A3 300 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 BHLHB9Q6PI77 547 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 DNAJC14Q6Y2X3 702 aaPredicted RBP12.35□□□□□ -0.43
CNN3-203ENST00000415017 NET1Q7Z628 596 aaPredicted RBP12.35□□□□□ -0.43
CNN3-203ENST00000415017 ARPINQ7Z6K5 226 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 CALHM3Q86XJ0 350 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 RAB43Q86YS6 212 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 CLEC4FQ8N1N0 589 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 ZNF321PQ8N8H1 164 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 ZNF441Q8N8Z8 693 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 C17orf47Q8NEP4 570 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 NUP43Q8NFH3 380 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 OR52N2Q8NGI0 321 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 MS4A4EQ96PG1 132 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 SLC39A3Q9BRY0 314 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 BTBD10Q9BSF8 475 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 LMF2Q9BU23 707 aaKnown RBP12.35□□□□□ -0.43
CNN3-203ENST00000415017 OR10A5Q9H207 317 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 LRMDAQ9H2I8 198 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 MMP25Q9NPA2 562 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 ZCCHC3Q9NUD5 404 aaKnown RBP12.35□□□□□ -0.43
CNN3-203ENST00000415017 CMTM6Q9NX76 183 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 P4HTMQ9NXG6 502 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 CD300AQ9UGN4 299 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 ERVK-19Q9WJR5 959 aa12.35□□□□□ -0.43
CNN3-203ENST00000415017 HEMK1Q9Y5R4 338 aaPredicted RBP12.35□□□□□ -0.43
CNN3-203ENST00000415017 TMEM200CA6NKL6 621 aa12.34□□□□□ -0.43
CNN3-203ENST00000415017 TTC36A6NLP5 189 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms