RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 EID3Q8N140 333 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 C1orf52Q8N6N3 182 aaKnown RBP9.36□□□□□ -0.91
DDB1-202ENST00000414411 AMER3Q8N944 861 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 ACOT4Q8N9L9 421 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 TTC29Q8NA56 475 aaPredicted RBP9.36□□□□□ -0.91
DDB1-202ENST00000414411 ZCCHC10Q8TBK6 192 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 PNPT1Q8TCS8 783 aaKnown RBP9.36□□□□□ -0.91
DDB1-202ENST00000414411 STARD8Q92502 1023 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 MVB12AQ96EY5 273 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 PYURFQ96I23 114 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 PANX1Q96RD7 426 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 MBOAT4Q96T53 435 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 RBM4BQ9BQ04 359 aaKnown RBP9.36□□□□□ -0.91
DDB1-202ENST00000414411 ZPBPQ9BS86 351 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 DDA1Q9BW61 102 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 RBM4Q9BWF3 364 aaKnown RBP9.36□□□□□ -0.91
DDB1-202ENST00000414411 SORBS1Q9BX66 1292 aaKnown RBP9.36□□□□□ -0.91
DDB1-202ENST00000414411 ASPSCR1Q9BZE9 553 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 B3GNT4Q9C0J1 378 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 SMURF2Q9HAU4 748 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 IFT80Q9P2H3 777 aaPredicted RBP9.36□□□□□ -0.91
DDB1-202ENST00000414411 ADAM29Q9UKF5 820 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 SAMD4AQ9UPU9 718 aaKnown RBP9.36□□□□□ -0.91
DDB1-202ENST00000414411 WASF3Q9UPY6 502 aa9.36□□□□□ -0.91
DDB1-202ENST00000414411 NUP214P35658 2090 aaPredicted RBP9.36□□□□□ -0.91
DDB1-202ENST00000414411 A0A0A6YYD5 115 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 A0A0G2JN53 185 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 C9orf172C9J069 976 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 CLIC1O00299 241 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 SCAMP2O15127 329 aaKnown RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 DNAJB6O75190 326 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 SCRG1O75711 98 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 NSA2O95478 260 aaKnown RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 ONECUT2O95948 504 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 C1QCP02747 245 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 JMJD7P0C870 316 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 GPX2P18283 190 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 HIST1H1TP22492 207 aaPredicted RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 ELK4P28324 431 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 TTKP33981 857 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 YAP1P46937 504 aaKnown RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 BTN3A2P78410 334 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 TGM3Q08188 693 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 COL9A2Q14055 689 aaPredicted RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 NDUFA9Q16795 377 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 C3orf38Q5JPI3 329 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 DCAF12Q5T6F0 453 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 ZNF385CQ66K41 422 aaPredicted RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 TTLL10Q6ZVT0 673 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 TMEM179BQ7Z7N9 219 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 C8orf59Q8N0T1 100 aaPredicted RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 OR9A4Q8NGU2 314 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 OR5K1Q8NHB7 308 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDB1-202ENST00000414411 ISOC1Q96CN7 298 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 SLC46A1Q96NT5 459 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 NDC1Q9BTX1 674 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 AMBRA1Q9C0C7 1298 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 ING2Q9H160 280 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 POLR1BQ9H9Y6 1135 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 TIMMDC1Q9NPL8 285 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 FAM118AQ9NWS6 357 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 IRAK4Q9NWZ3 460 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 DHCR7Q9UBM7 475 aaKnown RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 PISDQ9UG56 409 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 SRPK3Q9UPE1 567 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 NAALAD2Q9Y3Q0 740 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 TMEM184BQ9Y519 407 aaPredicted RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 SDK2Q58EX2 2172 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 A0A0A6YYC8 382 aaPredicted RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 H0YIG0 161 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 I3L1I5 382 aaPredicted RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 DSCR3O14972 297 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 E2F6O75461 281 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 MYO1DO94832 1006 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 NTRK1P04629 796 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 KLK1P06870 262 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 HBQ1P09105 142 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 ZNF28P17035 718 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 RORAP35398 523 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 PIGAP37287 484 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 ASMTP46597 345 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 MAPK10P53779 464 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 PMS2P3Q13401 168 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 RUNX2Q13950 521 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 RAB39AQ14964 217 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 VMACQ2NL98 169 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 LRRC23Q53EV4 343 aaPredicted RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 CPZQ66K79 652 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 MRM1Q6IN84 353 aaKnown RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 NIPAL1Q6NVV3 410 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 ERICH5Q6P6B1 374 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 ZNF773Q6PK81 442 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 IGF2-ASQ6U949 168 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 PAGE2Q7Z2X7 111 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 CAMKMTQ7Z624 323 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 THAP5Q7Z6K1 395 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 NUDT13Q86X67 352 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 CLVS1Q8IUQ0 354 aaPredicted RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 ZZZ3Q8IYH5 903 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms