RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 C17orf47Q8NEP4 570 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 TTLQ8NG68 377 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 OR2I1PQ8NGU4 316 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 NDNFQ8TB73 568 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 RNASE8Q8TDE3 154 aaKnown RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 PROX1Q92786 737 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 TMEM125Q96AQ2 219 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 BIRC7Q96CA5 298 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 ELP4Q96EB1 424 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 YIPF6Q96EC8 236 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 AGAP4Q96P64 663 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 OMDQ99983 421 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 DPYSL5Q9BPU6 564 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 PLEKHA2Q9HB19 425 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 DIABLOQ9NR28 239 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 TDP1Q9NUW8 608 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 GPATCH2Q9NW75 528 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 TMEM248Q9NWD8 314 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 USE1Q9NZ43 259 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 ADAM18Q9Y3Q7 739 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 A0A0A6YYC8 382 aaPredicted RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 FAM95CA0A1B0GW59 222 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 DRGXA6NNA5 263 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CENPXA8MT69 81 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 I3L1I5 382 aaPredicted RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 BTN3A1O00481 513 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 ARHGAP33O14559 1287 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 RAMP2O60895 175 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 ADAM11O75078 769 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF888P0CJ79 500 aaPredicted RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 RAP2AP10114 183 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 IL7RP16871 459 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 PTNP21246 168 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CD27P26842 260 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 HOXA9P31269 272 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CD68P34810 354 aaPredicted RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 RYKP34925 604 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 POU4F1Q01851 419 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 MVKQ03426 396 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 VPS26BQ4G0F5 336 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 LCN1P1Q5VSP4 162 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 PNCKQ6P2M8 343 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CLEC9AQ6UXN8 241 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 LINGO4Q6UY18 593 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 RFPL4BQ6ZWI9 263 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 MCATQ8IVS2 390 aaKnown RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 SPATA22Q8NHS9 363 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 MCFD2Q8NI22 146 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 FAR1Q8WVX9 515 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 RLN3Q8WXF3 142 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 FGF13Q92913 245 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CEP19Q96LK0 163 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 C12orf66Q96MD2 445 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 RNF145Q96MT1 663 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 QRFPRQ96P65 431 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF300Q96RE9 604 aaPredicted RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 APOL2Q9BQE5 337 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CCM2Q9BSQ5 444 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CCDC90BQ9GZT6 254 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 TOR3AQ9H497 397 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 NSUN3Q9H649 340 aaKnown RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 FBXO34Q9NWN3 711 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CLDND1Q9NY35 253 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CLEC1BQ9P126 229 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 MAGEL2Q9UJ55 1249 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 PLCL2Q9UPR0 1127 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 WBP11Q9Y2W2 641 aaKnown RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 TCRBV21S2A2A0A5A6 115 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 ANXA2P2A6NMY6 339 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 PDZK1P1A8MUH7 402 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 KDM4EB2RXH2 506 aaPredicted RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 SLC1A7O00341 560 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 TBX19O60806 448 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 VPS4BO75351 444 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 RHOBTB1O94844 696 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 MT-CYBP00156 380 aaPredicted RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 C1RP00736 705 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 AHSGP02765 367 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 DRD5P21918 477 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 TUBG1P23258 451 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 ACVR2AP27037 513 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 UGT2B10P36537 528 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 S100A12P80511 92 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 SLC10A7Q0GE19 358 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 CDH17Q12864 832 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 GRIK2Q13002 908 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 FADDQ13158 208 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 NFYCQ13952 458 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 CAPRIN1Q14444 709 aaKnown RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 MEP1AQ16819 746 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 NRN1LQ496H8 165 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF470Q6ECI4 717 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 NAPEPLDQ6IQ20 393 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 ARMC6Q6NXE6 501 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 TMEM25Q86YD3 366 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 NPAS3Q8IXF0 933 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 SVOPLQ8N434 492 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 NAT16Q8N8M0 369 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 TMEM116Q8NCL8 245 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms