RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PCK2Q16822 640 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 C15orf32Q32M92 178 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 IFI44LQ53G44 452 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 ZNF506Q5JVG8 444 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 ZNF774Q6NX45 483 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 WDR49Q8IV35 697 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 STHQ8IWL8 128 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 UNC45BQ8IWX7 931 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 FAM9BQ8IZU0 186 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLC39A11Q8N1S5 342 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 FBXW8Q8N3Y1 598 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 BEST4Q8NFU0 473 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 PSMA8Q8TAA3 256 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 FLVCR1-AS1Q8TAF5 88 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 GLYATL1Q969I3 302 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 PNPLA2Q96AD5 504 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 C5orf30Q96GV9 206 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 CAPNS2Q96L46 248 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 GANQ9H2C0 597 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 NT5DC2Q9H857 520 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 ACOXLQ9NUZ1 547 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 COMMD8Q9NX08 183 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 ZNF581Q9P0T4 197 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 MGAT4AQ9UM21 535 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 EXOC6BQ9Y2D4 811 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 USP6P35125 1406 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 ANKARQ7Z5J8 1434 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 ADGRL3Q9HAR2 1447 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 TOGARAM1Q9Y4F4 1720 aa2.98□□□□□ -1.93
HMGB1P11-201ENST00000413899 CASZ1Q86V15 1759 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 UBR2Q8IWV8 1755 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 PHLPP1O60346 1717 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 NCAPD2Q15021 1401 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 C5orf51A6NDU8 294 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 SLC28A1O00337 649 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 SH3BGRLO75368 114 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 HPP00738 406 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 CALCAP01258 141 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 MT-ND1P03886 318 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 CHRNGP07510 517 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 MELTFP08582 738 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 SERPINF2P08697 491 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 CCDC159P0C7I6 412 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 ELK3P41970 407 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 ALDH3B1P43353 468 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 KCNK10P57789 538 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 ITPK1Q13572 414 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 WSCD2Q2TBF2 565 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 WDR25Q64LD2 544 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 RHBDD2Q6NTF9 364 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 B3GLCTQ6Y288 498 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 Q6ZR54 194 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 OR6M1Q8NGM8 313 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 OR1K1Q8NGR3 316 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 ESAMQ96AP7 390 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 NTNG2Q96CW9 530 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 RUNDC3BQ96NL0 473 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 PRAM1Q96QH2 718 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 CXXC4Q9H2H0 198 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 LIME1Q9H400 295 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 DPEP3Q9H4B8 488 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 FAM212BQ9NTI7 297 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 MRPS2Q9Y399 296 aaKnown RBP2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 CPQQ9Y646 472 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 CACNA1FO60840 1977 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 ABCC6O95255 1503 aa2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 COL16A1Q07092 1604 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P11-201ENST00000413899 NRAPQ86VF7 1730 aa2.96□□□□□ -1.93
HMGB1P11-201ENST00000413899 EVC2Q86UK5 1308 aa2.96□□□□□ -1.93
HMGB1P11-201ENST00000413899 ARID2Q68CP9 1835 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 A0A1B0GTH9 108 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 SH3PXD2BA1X283 911 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 FOXI3A8MTJ6 420 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 RNF212BA8MTL3 300 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 E2F3O00716 465 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 GPRIN2O60269 458 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 TSPAN2O60636 221 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 KINO60870 393 aaKnown RBP2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 ANXA9O76027 345 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 TPBGLP0DKB5 382 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 B4GALT1P15291 398 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 ID1P41134 155 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 MTIF2P46199 727 aaKnown RBP2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 CDKL1Q00532 357 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 PDE7AQ13946 482 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 P2RY14Q15391 338 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 C2orf76Q3KRA6 126 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 EPC2Q52LR7 807 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 MPPE1Q53F39 396 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 SLC25A30Q5SVS4 291 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 RFWD3Q6PCD5 774 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 REG3GQ6UW15 175 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 Q6ZRG5 221 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 CCDC71Q8IV32 467 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 CARNMT1Q8N4J0 409 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 SAMD12Q8N8I0 201 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 OR4Q3Q8NH05 313 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 OR4F5Q8NH21 305 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 OR4L1Q8NH43 312 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms