RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 NTRK2Q16620 822 aa13.1□□□□□ -0.31
SMARCA4-202ENST00000413806 RTP2Q5QGT7 225 aa13.1□□□□□ -0.31
SMARCA4-202ENST00000413806 SLC35F1Q5T1Q4 408 aa13.1□□□□□ -0.31
SMARCA4-202ENST00000413806 SLC16A9Q7RTY1 509 aa13.1□□□□□ -0.31
SMARCA4-202ENST00000413806 LMX1AQ8TE12 382 aa13.1□□□□□ -0.31
SMARCA4-202ENST00000413806 CMKLR1Q99788 373 aa13.1□□□□□ -0.31
SMARCA4-202ENST00000413806 NUFIP1Q9UHK0 495 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-202ENST00000413806 ZNF878C9JN71 531 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 LDB2O43679 373 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 PGGT1BP53609 377 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 ZNF674Q2M3X9 581 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 GLT8D1Q68CQ7 371 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 RASGRP3Q8IV61 690 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 RBP7Q96R05 134 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 RAD9AQ99638 391 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 DPH2Q9BQC3 489 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 LHPPQ9H008 270 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 KHNYNO15037 678 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 POLR1CO15160 346 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 CSTBP04080 98 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 IQCF3P0C7M6 154 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 ESX1Q8N693 406 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 OR4C15Q8NGM1 316 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 OR52P1PQ8NH57 321 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 TMEM40Q8WWA1 233 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 NSMAFQ92636 917 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 ARHGAP39Q9C0H5 1083 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 SEC61A2Q9H9S3 476 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 BRF2Q9HAW0 419 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 ASF1BQ9NVP2 202 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 RGS9O75916 674 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 GKN3PP0CG01 181 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 CAPN3P20807 821 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 BMXP51813 675 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 ACTA2P62736 377 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 ACTG2P63267 376 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 SPHARQ15513 63 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 SGCBQ16585 318 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 ATAD3CQ5T2N8 411 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 CES4AQ5XG92 561 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 ALKBH2Q6NS38 261 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 ZNF529Q6P280 563 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 APCDD1Q8J025 514 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 ARFGAP1Q8N6T3 406 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 CCDC54Q8NEL0 328 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 OR56A3Q8NH54 315 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 GATA6Q92908 595 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 NLKQ9UBE8 527 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 KLHL21Q9UJP4 597 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 SARDHQ9UL12 918 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 SLC22A31A6NKX4 558 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 CKMT1AP12532 417 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 CELP19835 753 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 HK3P52790 923 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 NCS1P62166 190 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 CD200R1Q8TD46 325 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 KLHDC7BQ96G42 594 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 P2RY13Q9BPV8 354 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 METTL7AQ9H8H3 244 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 OR2S2Q9NQN1 319 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 HRASLS2Q9NWW9 162 aa13.09□□□□□ -0.31
SMARCA4-202ENST00000413806 GMDSO60547 372 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 GABRA3P34903 492 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 GMPRP36959 345 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 MLLT10P55197 1068 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 SSTP61278 116 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 BTN1A1Q13410 526 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 GRM2Q14416 872 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 LDLRAD1Q5T700 205 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 KIAA0319Q5VV43 1072 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 C16orf78Q8WTQ4 265 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 THAP4Q8WY91 577 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 TMEM234Q8WY98 164 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 F2RL3Q96RI0 385 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 NPLQ9BXD5 320 aaPredicted RBP13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 KCNK13Q9HB14 408 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 RDH14Q9HBH5 336 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 HHATLQ9HCP6 504 aa13.08□□□□□ -0.31
SMARCA4-202ENST00000413806 ZNF701M0R085 212 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 RPS17P08708 135 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 RAB33AQ14088 237 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 GAS6Q14393 721 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 TBC1D25Q3MII6 688 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 NKAPLQ5M9Q1 402 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 CNTN4Q8IWV2 1026 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 ABCG5Q9H222 651 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 BTNL2Q9UIR0 455 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 AP1M2Q9Y6Q5 423 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 OR6C74A6NCV1 312 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 RNF13O43567 381 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 CREBL2O60519 120 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 STSP08842 583 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 MC2RQ01718 297 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 ELOCQ15369 112 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 MPP7Q5T2T1 576 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 ARHGAP11AQ6P4F7 1023 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 ZNF440Q8IYI8 595 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 ADAMTS18Q8TE60 1221 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 TMEM125Q96AQ2 219 aa13.08□□□□□ -0.32
SMARCA4-202ENST00000413806 SECISBP2Q96T21 854 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms