RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 FAM53BQ14153 422 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 EXOSC7Q15024 291 aaKnown RBP8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 DUSP5Q16690 384 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 FOXB2Q5VYV0 432 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 KDM4DQ6B0I6 523 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 TCTN3Q6NUS6 607 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 FAHD1Q6P587 224 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 SZRD1Q7Z422 152 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 ZDHHC13Q8IUH4 622 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 SLC30A8Q8IWU4 369 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 LGI4Q8N135 537 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 EID2Q8N6I1 236 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 SPPL2AQ8TCT8 520 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 CDS1Q92903 461 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 POP5Q969H6 163 aaKnown RBP8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 UBE2FQ969M7 185 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 ZDHHC12Q96GR4 267 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 SLC41A2Q96JW4 573 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 MUS81Q96NY9 551 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 COL21A1Q96P44 957 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 CD180Q99467 661 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 FUZQ9BT04 418 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 ACTRT3Q9BYD9 372 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 GABARAPL1Q9H0R8 117 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 SLC38A1Q9H2H9 487 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 SMOC1Q9H4F8 434 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 GAREM1Q9H706 876 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 PDE7BQ9NP56 450 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 EQTNQ9NQ60 294 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 NECTIN3Q9NQS3 549 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 C8orf4Q9NR00 106 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 THSD1Q9NS62 852 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 LANCL2Q9NS86 450 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 GIMAP4Q9NUV9 329 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 ZSCAN32Q9NX65 697 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 GIN1Q9NXP7 522 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 NLGN3Q9NZ94 848 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 PDP1Q9P0J1 537 aaPredicted RBP8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 RHCGQ9UBD6 479 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 AASSQ9UDR5 926 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 KCNE5Q9UJ90 142 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 SAMHD1Q9Y3Z3 626 aaKnown RBP8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 ZNF451Q9Y4E5 1061 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 PCDHGB3Q9Y5G1 929 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 MAU2Q9Y6X3 613 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 ENPP4Q9Y6X5 453 aa8.07□□□□□ -1.12
HMGN1P34-201ENST00000413023 MN1Q10571 1320 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 TECTAO75443 2155 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 A0A087WV62 115 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 A0A0G2JPF8 293 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 GXYLT2A0PJZ3 443 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 HNRNPCL2B2RXH8 293 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 HNRNPCL3B7ZW38 293 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 C5orf58C9J3I9 102 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 H0YAE9 185 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 HS6ST1O60243 411 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 PLOD3O60568 738 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 CTNSO60931 367 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 E2F6O75461 281 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 NSA2O95478 260 aaKnown RBP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 H6PDO95479 791 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 NTN1O95631 604 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 HPRP00739 348 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 CLPSP04118 112 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 LINGO3P0C6S8 592 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 SP9P0CG40 484 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 SLC35E2P0CK97 266 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 HNRNPCL4P0DMR1 293 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 THRBP10828 461 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 HOXB6P17509 224 aaKnown RBP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 MAOAP21397 527 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 NT5EP21589 574 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 MLLT3P42568 568 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 ARRB1P49407 418 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 PPM1FP49593 454 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 CLK3P49761 638 aaKnown RBP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 KHKP50053 298 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 CDH15P55291 814 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 HSD11B2P80365 405 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 LSM11P83369 360 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 MAP4K2Q12851 820 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 FOXD4Q12950 439 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 NPTX1Q15818 432 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 LPAL2Q16609 132 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 EXOC3L2Q2M3D2 409 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 CTU2Q2VPK5 515 aaKnown RBP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 CCNJQ5T5M9 372 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 LAIR1Q6GTX8 287 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 CDC73Q6P1J9 531 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 Q6ZPB1 254 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 PRSS42Q7Z5A4 293 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 GALNT5Q7Z7M9 940 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 ZAR1Q86SH2 424 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 VRK2Q86Y07 508 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 HIPK1Q86Z02 1210 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 OFCC1Q8IZS5 231 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 CLIP4Q8N3C7 705 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 SLC5A8Q8N695 610 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 METTL25Q8N6Q8 603 aa8.06□□□□□ -1.12
HMGN1P34-201ENST00000413023 TTC29Q8NA56 475 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms