RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 C9JVG2 144 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 POLR3GO15318 223 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-206ENST00000412056 PLOD3O60568 738 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 PRAMEF2O60811 474 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 SORBS2O94875 1100 aaKnown RBP12.91□□□□□ -0.34
CPNE1-206ENST00000412056 NADKO95544 446 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-206ENST00000412056 DDX5P17844 614 aaKnown RBP12.91□□□□□ -0.34
CPNE1-206ENST00000412056 IL12AP29459 219 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 MDH1P40925 334 aaKnown RBP12.91□□□□□ -0.34
CPNE1-206ENST00000412056 CASRP41180 1078 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 SOX3P41225 446 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 EMDP50402 254 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 TNFSF10P50591 281 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 UFM1P61960 85 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 OC90Q02509 493 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF169Q14929 603 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-206ENST00000412056 OR1C1Q15619 314 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 NNATQ16517 81 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 PGS1Q32NB8 556 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 OR4F3Q6IEY1 312 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 CAMKMTQ7Z624 323 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 RFWD2Q8NHY2 731 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 ASB15Q8WXK1 588 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 ADIPOR1Q96A54 375 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 ERP27Q96DN0 273 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 MAGED4Q96JG8 741 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 TEX37Q96LM6 180 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 DUSP26Q9BV47 211 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 HES7Q9BYE0 225 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 CCDC134Q9H6E4 229 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 NPHS2Q9NP85 383 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 ACSS1Q9NUB1 689 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-206ENST00000412056 ATAD3AQ9NVI7 634 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 ANAPC2Q9UJX6 822 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 MAPRE3Q9UPY8 281 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 HEMK1Q9Y5R4 338 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-206ENST00000412056 NINQ8N4C6 2090 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 SHANK1Q9Y566 2161 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 SPTA1P02549 2419 aa12.91□□□□□ -0.34
CPNE1-206ENST00000412056 A0A087WV62 115 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 TRAV17A0A0B4J275 112 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 B8ZZF3 427 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 E9PBE3 544 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 UPK1AO00322 258 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 PLOD2O00469 737 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 UBDO15205 165 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 OR6B1O95007 311 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 C6orf47O95873 294 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 IDO1P14902 403 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 TRHRP34981 398 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 GPC1P35052 558 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 CYB561P49447 251 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 HLCSP50747 726 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 NR0B1P51843 470 aaKnown RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 MANFP55145 182 aaKnown RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 WNT3P56703 355 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 TLR1Q15399 786 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 PDCD4Q53EL6 469 aaKnown RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 PIGGQ5H8A4 983 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 SPANXN4Q5MJ08 99 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 HLA-DQA1Q5Y7H0 255 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 SPINK14Q6IE38 97 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 LYPD8Q6UX82 237 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF227Q86WZ6 799 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 OR2L13Q8N349 312 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 TMEM156Q8N614 296 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 SLC22A8Q8TCC7 542 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 TESCQ96BS2 214 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 ELP4Q96EB1 424 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 PRPF18Q99633 342 aaKnown RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 CCDC28BQ9BUN5 200 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 BHLHE41Q9C0J9 482 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 NXF5Q9H1B4 397 aaKnown RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 CLMPQ9H6B4 373 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 TRIM45Q9H8W5 580 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 SIRT3Q9NTG7 399 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 DDX18Q9NVP1 670 aaKnown RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 LRFN1Q9P244 771 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 DCTN4Q9UJW0 460 aa12.9□□□□□ -0.34
CPNE1-206ENST00000412056 C19orf53Q9UNZ5 99 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-206ENST00000412056 CHD6Q8TD26 2715 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 A0A1W2PRB8 838 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 A8MVJ9 347 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 SUV39H1O43463 412 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 COQ9O75208 318 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 BCAS2O75934 225 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-206ENST00000412056 NEURL1O76050 574 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 SLITRK5O94991 958 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 VIMP08670 466 aaKnown RBP12.89□□□□□ -0.35
CPNE1-206ENST00000412056 IFI6P09912 130 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 CLNS1AP54105 237 aaKnown RBP12.89□□□□□ -0.35
CPNE1-206ENST00000412056 PHC1P78364 1004 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 ZNF155Q12901 538 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-206ENST00000412056 RPS6KA2Q15349 733 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 GSTA3Q16772 222 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 PRR30Q53SZ7 412 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-206ENST00000412056 ZNF766Q5HY98 468 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 CGB2Q6NT52 195 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 IL20RBQ6UXL0 311 aa12.89□□□□□ -0.35
CPNE1-206ENST00000412056 TMEM64Q6YI46 380 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms