RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 VEZTQ9HBM0 779 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 APMAPQ9HDC9 416 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 Q9N2J8 555 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 FANCFQ9NPI8 374 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 SDR39U1Q9NRG7 319 aaPredicted RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 TOPORSQ9NS56 1045 aaPredicted RBP-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPTLC3Q9NUV7 552 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MCUBQ9NWR8 336 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 HAO2Q9NYQ3 351 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF492Q9P255 531 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 KLHL42Q9P2K6 505 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 ASAP1Q9ULH1 1129 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC7A11Q9UPY5 501 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CCL26Q9Y258 94 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZFP30Q9Y2G7 519 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 PAM16Q9Y3D7 125 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 GRIP1Q9Y3R0 1128 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 WIPI2Q9Y4P8 454 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 OARD1Q9Y530 152 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 PAXBP1Q9Y5B6 917 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 KLK4Q9Y5K2 254 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 GPRASP1Q5JY77 1395 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 MYH11P35749 1972 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 BCORL1Q5H9F3 1711 aa-1.91□□□□□ -2.71
RNU4-88P-201ENST00000411220 MEIKINA0A087WXM9 373 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRAV20A0A0B4J274 112 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 A0A1W2PR80 420 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 E2F8A0AVK6 867 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM221A6NGB7 291 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 A8MUN3 132 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 A8MWL6 223 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 LMO7DNF2Z398 122 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 C15orf65H3BRN8 121 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 CLDN34H7C241 214 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 hCG_1984214I3L0E3 225 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ACKR2O00590 384 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 PRMT5O14744 637 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF264O43296 627 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 PSCAO43653 123 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR2T1O43869 369 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 NDUFS6O75380 124 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 PALMO75781 387 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ALDH1L1O75891 902 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SUPT7LO94864 414 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ASMTLO95671 621 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 THP07101 528 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ATP2A2P16615 1042 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 CASTP20810 708 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TBXA2RP21731 343 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TSPOP30536 169 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 FCGR2BP31994 310 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 FCGR2CP31995 323 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 HTR7P34969 479 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 NUP62P37198 522 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 P2RY2P41231 377 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 NT5C2P49902 561 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF131P52739 623 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 RIDAP52758 137 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 PNLIPRP1P54315 467 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 NAGLUP54802 743 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 CDH4P55283 916 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 RPS3AP61247 264 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TNFRSF17Q02223 184 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF92Q03936 586 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC34A1Q06495 639 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCDC15Q0P6D6 951 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 EIF3IQ13347 325 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 MAMLD1Q13495 774 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 RAB31Q13636 194 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 GK2Q14410 553 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SIX1Q15475 284 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ATP13A5Q4VNC0 1218 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM69Q5SWH9 247 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM91A1Q658Y4 838 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 MRM1Q6IN84 353 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 B4GALNT3Q6L9W6 998 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 CXorf57Q6NSI4 855 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 AADACL2Q6P093 401 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMPRSS11FQ6ZWK6 438 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SGPP2Q8IWX5 399 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 PM20D2Q8IYS1 436 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF679Q8IYX0 411 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 NXPE1Q8N323 547 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM156Q8N614 296 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 EMC1Q8N766 993 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 C3orf56Q8N813 242 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 Q8N976 141 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SMYD1Q8NB12 490 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 BBS1Q8NFJ9 593 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 IPMKQ8NFU5 416 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 LINS1Q8NG48 757 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR52N4Q8NGI2 321 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR6S1Q8NH40 331 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR4A16Q8NH70 328 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 MAPK15Q8TD08 544 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 CREB3L4Q8TEY5 395 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ACOT11Q8WXI4 607 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM158Q8WZ71 300 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC7A6Q92536 515 aa-1.91□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms