RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ZNF764Q96H86 408 aaPredicted RBP28.78■■■□□ 2.2
TRAF3IP1-203ENST00000409739 ATP6V1G3Q96LB4 118 aa28.78■■■□□ 2.2
TRAF3IP1-203ENST00000409739 LRATO95237 230 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 MAPK1P28482 360 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 NTSP30990 170 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 MPIP34949 423 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 NR0B1P51843 470 aaKnown RBP28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 ZNF791Q3KP31 576 aaPredicted RBP28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 SULF2Q8IWU5 870 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 GOLM1Q8NBJ4 401 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 TP53INP1Q96A56 240 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 TUBGCP3Q96CW5 907 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 SPACA9Q96E40 222 aaPredicted RBP28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 SH3GL2Q99962 352 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 C1orf50Q9BV19 199 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 REEP4Q9H6H4 257 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 VIPAS39Q9H9C1 493 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 ANKRA2Q9H9E1 313 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 RYDENQ9NUL5 291 aaKnown RBP28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 CFL2Q9Y281 166 aa28.77■■■□□ 2.2
TRAF3IP1-203ENST00000409739 AKAP10O43572 662 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 FBXO45P0C2W1 286 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 ASMTP46597 345 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 MEOX1P50221 254 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 NCBP2P52298 156 aaKnown RBP eCLIP28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 GPR85P60893 370 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 ANKRD26P1Q6NSI1 321 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 KIRREL3Q8IZU9 778 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 LIX1Q8N485 282 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 C17orf47Q8NEP4 570 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 ERP27Q96DN0 273 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 SGCZQ96LD1 299 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 ITPAQ9BY32 194 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 DEPPQ9NTK1 212 aa28.76■■■□□ 2.19
TRAF3IP1-203ENST00000409739 GTF3C1Q12789 2109 aa28.75■■■□□ 2.19
TRAF3IP1-203ENST00000409739 KLRC4-KLRK1H3BQV0 150 aa28.75■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PEX1O43933 1283 aa28.75■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PDE7AQ13946 482 aa28.75■■■□□ 2.19
TRAF3IP1-203ENST00000409739 ZNF385BQ569K4 471 aa28.75■■■□□ 2.19
TRAF3IP1-203ENST00000409739 TAGAPQ8N103 731 aa28.75■■■□□ 2.19
TRAF3IP1-203ENST00000409739 FNDC5Q8NAU1 212 aa28.75■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PPP1R36Q96LQ0 422 aa28.75■■■□□ 2.19
TRAF3IP1-203ENST00000409739 GLIPR2Q9H4G4 154 aa28.75■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PNPOQ9NVS9 261 aa28.75■■■□□ 2.19
TRAF3IP1-203ENST00000409739 A0A0G2JMM0 328 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 A0A1W2PPB8 328 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 A0A1W2PRS3 328 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 KIR3DP1A8MWS1 328 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 TBX19O60806 448 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 SNNO75324 88 aaPredicted RBP28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 CCL3P10147 92 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 EMDP50402 254 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 ELOAQ14241 798 aaKnown RBP28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 EIF2S3LQ2VIR3 472 aaKnown RBP28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 FHL5Q5TD97 284 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 DND1Q8IYX4 353 aaKnown RBP28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 OR7G2Q8NG99 324 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 RAB3IL1Q8TBN0 382 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PPCDCQ96CD2 204 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 AMDHD1Q96NU7 426 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 NXF5Q9H1B4 397 aaKnown RBP28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 SH2D2AQ9NP31 389 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PRODH2Q9UF12 536 aa28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 NUP214P35658 2090 aaPredicted RBP28.74■■■□□ 2.19
TRAF3IP1-203ENST00000409739 USP9XQ93008 2570 aaPredicted RBP28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 NCKAP5O14513 1909 aa28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PLOD3O60568 738 aa28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 WISP2O76076 250 aa28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 ALDH6A1Q02252 535 aaKnown RBP28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 NNATQ16517 81 aa28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 RNFT1Q5M7Z0 435 aa28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 IL23RQ5VWK5 629 aa28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 TMEM64Q6YI46 380 aa28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 POGLUT1Q8NBL1 392 aa28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 CIDECQ96AQ7 238 aaPredicted RBP28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 TSPAN10Q9H1Z9 355 aaPredicted RBP28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 THAP1Q9NVV9 213 aa28.73■■■□□ 2.19
TRAF3IP1-203ENST00000409739 CLEC18AA5D8T8 446 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PDPK1O15530 556 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 BCAS2O75934 225 aaPredicted RBP28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 ZNF24P17028 368 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 RFC3P40938 356 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 SRSF1Q07955 248 aaKnown RBP eCLIP28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PTGR1Q14914 329 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 NTRK2Q16620 822 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 CLEC18BQ6UXF7 455 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 SIAH3Q8IW03 269 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 TRIM42Q8IWZ5 723 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 ZFP62Q8NB50 900 aaPredicted RBP28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 CLEC18CQ8NCF0 446 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 MANSC1Q9H8J5 431 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 SACM1LQ9NTJ5 587 aa28.72■■■□□ 2.19
TRAF3IP1-203ENST00000409739 ZNF407Q9C0G0 2248 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 PINLYPA6NC86 204 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 G3V3Y1 287 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 SCAMP2O15127 329 aaKnown RBP28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 SLITRK5O94991 958 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 HPCAL1P37235 193 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 MC3RP41968 323 aa28.71■■■□□ 2.19
TRAF3IP1-203ENST00000409739 NRG3P56975 720 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms