RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 EGLN3Q9H6Z9 239 aa9.28□□□□□ -0.92
MSH2-202ENST00000406134 DIMT1Q9UNQ2 313 aaKnown RBP9.28□□□□□ -0.92
MSH2-202ENST00000406134 LATO43561 262 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 HTR3AP46098 478 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 MLLT11Q13015 90 aaPredicted RBP9.27□□□□□ -0.92
MSH2-202ENST00000406134 NDUFAF5Q5TEU4 345 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 UBQLNLQ8IYU4 475 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 KRT78Q8N1N4 520 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 KLHL6Q8WZ60 621 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 SLC25A46Q96AG3 418 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 EFHD2Q96C19 240 aaPredicted RBP9.27□□□□□ -0.92
MSH2-202ENST00000406134 NELL2Q99435 816 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 TIMP4Q99727 224 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 SLC30A2Q9BRI3 323 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 TEX101Q9BY14 249 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 HDAC8Q9BY41 377 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 PRSS16Q9NQE7 514 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 PRDM7Q9NQW5 492 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 SEMA3GQ9NS98 782 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 TXNL4BQ9NX01 149 aaKnown RBP9.27□□□□□ -0.92
MSH2-202ENST00000406134 KLHL3Q9UH77 587 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 STUB1Q9UNE7 303 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.27□□□□□ -0.92
MSH2-202ENST00000406134 RBMX2Q9Y388 322 aaKnown RBP9.27□□□□□ -0.92
MSH2-202ENST00000406134 PLEKHM1Q9Y4G2 1056 aa9.27□□□□□ -0.92
MSH2-202ENST00000406134 IQCMA0A1B0GVH7 501 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 A0A1W2PR48 441 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 EPHX1P07099 455 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 TRHRP34981 398 aaPredicted RBP9.27□□□□□ -0.93
MSH2-202ENST00000406134 TARDBPQ13148 414 aaKnown RBP eCLIP9.27□□□□□ -0.93
MSH2-202ENST00000406134 CEBPEQ15744 281 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 FAM78AQ5JUQ0 283 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 LIPKQ5VXJ0 399 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 TMC5Q6UXY8 1006 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 AMZ2Q86W34 360 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 C17orf64Q86WR6 236 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 SYT14Q8NB59 555 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 PROKR2Q8NFJ6 384 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 INSM2Q96T92 566 aaPredicted RBP9.27□□□□□ -0.93
MSH2-202ENST00000406134 CCDC32Q9BV29 185 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 C6orf106Q9H6K1 298 aaPredicted RBP9.27□□□□□ -0.93
MSH2-202ENST00000406134 BCL2L10Q9HD36 194 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 ADAM29Q9UKF5 820 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 ZFR2Q9UPR6 939 aaKnown RBP9.27□□□□□ -0.93
MSH2-202ENST00000406134 IGLON5A6NGN9 336 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 GLOD5A6NK44 160 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 SNPHO15079 494 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 DYRK3O43781 588 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 OR10H3O60404 316 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 DLGAP3O95886 979 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 PCCBP05166 539 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 ALPPL2P10696 532 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 SERPINB1P30740 379 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 CCR8P51685 355 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 HEPACAMQ14CZ8 416 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 FNDC3BQ53EP0 1204 aaKnown RBP9.27□□□□□ -0.93
MSH2-202ENST00000406134 C6orf132Q5T0Z8 1188 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 OR4C11Q6IEV9 310 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 ABI3BPQ7Z7G0 1075 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 SLC7A5P1Q8MH63 180 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 FBXL6Q8N531 539 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 POGLUT1Q8NBL1 392 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 OR8J1Q8NGP2 316 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 KLK6Q92876 244 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 C16orf58Q96GQ5 468 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 C17orf62Q9BQA9 187 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 MND1Q9BWT6 205 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 POLR2J3Q9H1A7 115 aaKnown RBP9.27□□□□□ -0.93
MSH2-202ENST00000406134 GPBP1L1Q9HC44 474 aaPredicted RBP9.27□□□□□ -0.93
MSH2-202ENST00000406134 WBP11Q9Y2W2 641 aaKnown RBP9.27□□□□□ -0.93
MSH2-202ENST00000406134 ATG4BQ9Y4P1 393 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 OR1A2Q9Y585 309 aa9.27□□□□□ -0.93
MSH2-202ENST00000406134 KLF4O43474 513 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 PCYT1AP49585 367 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 TMED10P49755 219 aaKnown RBP9.26□□□□□ -0.93
MSH2-202ENST00000406134 RPS25P62851 125 aaKnown RBP9.26□□□□□ -0.93
MSH2-202ENST00000406134 DMPKQ09013 629 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 ZNF155Q12901 538 aaPredicted RBP9.26□□□□□ -0.93
MSH2-202ENST00000406134 LARS2Q15031 903 aaKnown RBP9.26□□□□□ -0.93
MSH2-202ENST00000406134 OR2G6Q5TZ20 316 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 RTL10Q7L3V2 364 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 ADGRD2Q7Z7M1 963 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 AKAP14Q86UN6 197 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 NUDT13Q86X67 352 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 SLC34A3Q8N130 599 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 ARIH2OSQ8N7S6 290 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 BMPERQ8N8U9 685 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 SIMC1Q8NDZ2 872 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 OR4K5Q8NGD3 323 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 OR8D1Q8WZ84 308 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 MS4A6EQ96DS6 147 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 ST6GAL2Q96JF0 529 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 SOSTQ9BQB4 213 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 TMEM74BQ9NUR3 256 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 ENOPH1Q9UHY7 261 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 PRUNE2Q8WUY3 3088 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 A0A087WUU8 490 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 DVL2O14641 736 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 EFCAB14O75071 495 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 APOL3O95236 402 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms