RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TTLQ8NG68 377 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 SUN3Q8TAQ9 357 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 TMEM163Q8TC26 289 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 CXorf40AQ8TE69 158 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 TP53INP1Q96A56 240 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 ST6GAL2Q96JF0 529 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 ZSWIM3Q96MP5 696 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 AMDHD1Q96NU7 426 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 CAMK1GQ96NX5 476 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PRAP1Q96NZ9 151 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 MENTQ9BUN1 341 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PRRG3Q9BZD7 231 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 TIGARQ9NQ88 270 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 ZCCHC3Q9NUD5 404 aaKnown RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 DDX28Q9NUL7 540 aaKnown RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 TRPC4Q9UBN4 977 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PLEKHB1Q9UF11 243 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 GSTK1Q9Y2Q3 226 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 TMEM98Q9Y2Y6 226 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 EXOSC1Q9Y3B2 195 aaKnown RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 HCFC2Q9Y5Z7 792 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 SPIN1Q9Y657 262 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PLXND1Q9Y4D7 1925 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 A0A0A6YYD5 115 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 A0A0G2JPF8 293 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 A0A1W2PQL4 384 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 CENPXA8MT69 81 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 HNRNPCL2B2RXH8 293 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 HNRNPCL3B7ZW38 293 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 OR1F1O43749 312 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 MYCP01106 439 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 HNRNPCL4P0DMR1 293 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 TCEA1P23193 301 aaKnown RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 NTSP30990 170 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 GAS1P54826 345 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 ERVFC1P60507 584 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 MXD1Q05195 221 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 ZFP69Q49AA0 526 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 FNDC3BQ53EP0 1204 aaKnown RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 C22orf42Q6IC83 251 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 SZRD1Q7Z422 152 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 UBE3DQ7Z6J8 389 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 C12orf40Q86WS4 652 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 GJD3Q8N144 294 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 CACTIN-AS1Q8N1I8 211 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 MRPL43Q8N983 215 aaKnown RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 Q8N9G6 341 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 OR5D16Q8NGK9 328 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 OR6T1Q8NGN1 323 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 SFXN5Q8TD22 340 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 UFD1Q92890 307 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 DIRAS2Q96HU8 199 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PINK1Q9BXM7 581 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 MIXL1Q9H2W2 232 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 SLC35C2Q9NQQ7 365 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 FBXW2Q9UKT8 454 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 ZNF232Q9UNY5 417 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PRKAB1Q9Y478 270 aa10.13□□□□□ -0.79
CLIP4-204ENST00000404424 PCYT1BQ9Y5K3 369 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-204ENST00000404424 A0A1W2PPV9 198 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 HIDE1A8MVS5 230 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 CLTBP09497 229 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 AZGP1P25311 298 aaKnown RBP10.12□□□□□ -0.79
CLIP4-204ENST00000404424 FGF9P31371 208 aaPredicted RBP10.12□□□□□ -0.79
CLIP4-204ENST00000404424 GABRA5P31644 462 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 SSR2P43308 183 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 HYAL2Q12891 473 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 MINDY4Q4G0A6 757 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 TMEM35AQ53FP2 167 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 NDUFAF5Q5TEU4 345 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 SLC27A4Q6P1M0 643 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 QSOX2Q6ZRP7 698 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 COMTD1Q86VU5 262 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 RDH10Q8IZV5 341 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 TEX47Q8TBZ9 253 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 GNPDA2Q8TDQ7 276 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 ZNF296Q8WUU4 475 aaPredicted RBP10.12□□□□□ -0.79
CLIP4-204ENST00000404424 MOAP1Q96BY2 351 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 SLC38A2Q96QD8 506 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 DPH7Q9BTV6 452 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 RNF208Q9H0X6 261 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 SYNDIG1Q9H7V2 258 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 SLC23A2Q9UGH3 650 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.12□□□□□ -0.79
CLIP4-204ENST00000404424 SF3B6Q9Y3B4 125 aaKnown RBP10.12□□□□□ -0.79
CLIP4-204ENST00000404424 PRRC2BQ5JSZ5 2229 aaKnown RBP10.12□□□□□ -0.79
CLIP4-204ENST00000404424 CCDC182A6NF36 153 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 CENPBD1B2RD01 187 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 SYT5O00445 386 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 TMCC2O75069 709 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 EPPINO95925 133 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 CSF3P09919 207 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 CSF2RAP15509 400 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 SDC2P34741 201 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 NCBP2P52298 156 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLIP4-204ENST00000404424 TAS2R38P59533 333 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 CSNK1G2P78368 415 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 TMEM44Q2T9K0 475 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 SLC35F1Q5T1Q4 408 aa10.12□□□□□ -0.79
CLIP4-204ENST00000404424 PLPP4Q5VZY2 271 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms