RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 GIMAP4Q9NUV9 329 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 PAQR5Q9NXK6 330 aaPredicted RBP11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 MGAT4BQ9UQ53 548 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 TANC1Q9C0D5 1861 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 NPIPA5A0A0B4J1W7 369 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 ZAR1LA6NP61 321 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 NPIPA7E9PJI5 369 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 NPIPA8P0DM63 369 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 MC3RP41968 323 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 RPS25P62851 125 aaKnown RBP11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 SCN1BQ07699 218 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 CCNJQ5T5M9 372 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 MARCH9Q86YJ5 346 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 ADAMTS15Q8TE58 950 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 SMAP2Q8WU79 429 aaPredicted RBP11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 SLC6A17Q9H1V8 727 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 GLIPR2Q9H4G4 154 aa11.97□□□□□ -0.49
PPP4R1-202ENST00000400555 TBC1D3DA0A087WVF3 549 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TBC1D3IA0A087WXS9 549 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TBC1D3EA0A087X179 549 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TBC1D3KA0A087X1G2 549 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 ISPDA4D126 451 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TBC1D3FA6NER0 549 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TBC1D3LB9A6J9 549 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 FOXE1O00358 373 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 ADAP00813 363 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 MRPL3P09001 348 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 HBQ1P09105 142 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TBC1D3HP0C7X1 549 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 SOX18P35713 384 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 PIP5KL1Q5T9C9 394 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TBC1D3GQ6DHY5 549 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TBC1D3CQ6IPX1 549 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 VITQ6UXI7 678 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 ABI3BPQ7Z7G0 1075 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TBC1D3Q8IZP1 549 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 MRPL43Q8N983 215 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 OR51G2Q8NGK0 314 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 OR9A2Q8NGT5 310 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 VOPP1Q96AW1 172 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 FAIM2Q9BWQ8 316 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 PLA2G12AQ9BZM1 189 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TMEM38AQ9H6F2 299 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 MRPS30Q9NP92 439 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 MBNL1Q9NR56 388 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 DPP7Q9UHL4 492 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 PCDHGA3Q9Y5H0 932 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 SCN8AQ9UQD0 1980 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 SLC30A4O14863 429 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 GNSP15586 552 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 APEX1P27695 318 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 VEGFBP49765 207 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 SNRPD2P62316 118 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 TGM3Q08188 693 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 LILRA6Q6PI73 481 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 ATP6V1C2Q8NEY4 427 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 ZFPM2Q8WW38 1151 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 PHF21AQ96BD5 680 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 ZNF486Q96H40 463 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 CITED4Q96RK1 184 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 WACQ9BTA9 647 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 SGPP1Q9BX95 441 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 SLC35C2Q9NQQ7 365 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 GSTK1Q9Y2Q3 226 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 CMAHPQ9Y471 501 aa11.96□□□□□ -0.49
PPP4R1-202ENST00000400555 GBF1Q92538 1859 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 C1QTNF3-AMACRE9PGA6 284 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 CD79BP40259 229 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 CDH11P55287 796 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 DCDC1P59894 354 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 CHRNEQ04844 493 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 TOR1AIP1Q5JTV8 583 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 TMEM31Q5JXX7 168 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 RNF165Q6ZSG1 346 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 KRT74Q7RTS7 529 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 YAF2Q8IY57 180 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 OR2L2Q8NH16 312 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 BBS10Q8TAM1 723 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 ITPKCQ96DU7 683 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 KCTD7Q96MP8 289 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 SLC38A2Q96QD8 506 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 FYTTD1Q96QD9 318 aaKnown RBP11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 MED20Q9H944 212 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 THSD1Q9NS62 852 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 PLCXD1Q9NUJ7 323 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 ATG4BQ9Y4P1 393 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 WDR87Q6ZQQ6 2873 aa11.96□□□□□ -0.5
PPP4R1-202ENST00000400555 FAM240BA0A1B0GVZ2 78 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 ZC3H12DA2A288 527 aaKnown RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 FAAHO00519 579 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 B4GALT2O60909 372 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 SEMA7AO75326 666 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 RPN2P04844 631 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 IL7P13232 177 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 GJA8P48165 433 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 SMIM11AP58511 58 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 EIF4HQ15056 248 aaKnown RBP11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 OR4C11Q6IEV9 310 aa11.95□□□□□ -0.5
PPP4R1-202ENST00000400555 PLET1Q6UQ28 207 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms