RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 LRRC25Q8N386 305 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GPBAR1Q8TDU6 330 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TMEM168Q9H0V1 697 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 KLHL28Q9NXS3 571 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PTGFRNQ9P2B2 879 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 AASSQ9UDR5 926 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLC13A4Q9UKG4 626 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SPACA6W5XKT8 324 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 C2orf74A8MZ97 194 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RASGRP1O95267 797 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SEMA4FO95754 770 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 AK4P27144 223 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PRKAR1BP31321 381 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 LTBRP36941 435 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PRKAG1P54619 331 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ST3GAL4Q11206 333 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GPR19Q15760 415 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 OCLNQ16625 522 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ALG11Q2TAA5 492 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TIMM50Q3ZCQ8 353 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 C18orf63Q68DL7 685 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 C12orf73Q69YU5 71 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 C1orf94Q6P1W5 598 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PGBD2Q6P3X8 592 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FIGLAQ6QHK4 219 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CASP12Q6UXS9 341 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 USP53Q70EK8 1073 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ZNF367Q7RTV3 350 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RD3Q7Z3Z2 195 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 OR4K14Q8NGD5 310 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 OR5D16Q8NGK9 328 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 UCN3Q969E3 161 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TSACCQ96A04 125 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PLEKHA8Q96JA3 519 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 C10orf90Q96M02 699 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 OR7D2Q96RA2 312 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CACYBPQ9HB71 228 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FBXO8Q9NRD0 319 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 KCMF1Q9P0J7 381 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 USP36Q9P275 1121 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PILRAQ9UKJ1 303 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 IFT52Q9Y366 437 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GLOD5A6NK44 160 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TLR4O00206 839 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 UGT2B7P16662 529 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CPN2P22792 545 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CNR2P34972 360 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLC15A1P46059 708 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 NCF4Q15080 339 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TIGD6Q17RP2 521 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GPAT3Q53EU6 434 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PRRT3Q5FWE3 981 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ENTPD8Q5MY95 495 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 HEPHL1Q6MZM0 1159 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ZCCHC12Q6PEW1 402 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 Q6ZPB1 254 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FAM20CQ8IXL6 584 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLC7A13Q8TCU3 470 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 DYNC2LI1Q8TCX1 351 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 DACH2Q96NX9 599 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 MS4A4EQ96PG1 132 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 OCEL1Q9H607 264 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 EVA1AQ9H8M9 152 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 MTHFD2LQ9H903 347 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ETAA1Q9NY74 926 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ACTR10Q9NZ32 417 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RHCGQ9UBD6 479 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RPL36Q9Y3U8 105 aaKnown RBP16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 COL4A2P08572 1712 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CCDC88CQ9P219 2028 aa16.66■□□□□ 0.26
HLA-DQB1-204ENST00000399084 A0A0J9YVX5 310 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SEMA7AO75326 666 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 NME6O75414 186 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 EML2O95834 649 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ALPPP05187 535 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CHRM4P08173 479 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ZNF888P0CJ79 500 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 POU2F1P14859 743 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TGFBR2P37173 567 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FEN1P39748 380 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 XKP51811 444 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FAM214AQ32MH5 1076 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PLAG1Q6DJT9 500 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CDC73Q6P1J9 531 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TMEM107Q6UX40 140 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TMEM92Q6UXU6 159 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 Q6ZSR6 202 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLCO6A1Q86UG4 719 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RPLP0P6Q8NHW5 317 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ZNF675Q8TD23 568 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ADAMTS15Q8TE58 950 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RERGQ96A58 199 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SH3YL1Q96HL8 342 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ZFYVE21Q9BQ24 234 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 POLR2J2Q9GZM3 115 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLC25A19Q9HC21 320 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 POLMQ9NP87 494 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ZNF232Q9UNY5 417 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TCRBV21S2A2A0A5A6 115 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 EFCAB9A8MZ26 197 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms