RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 RHDQ02161 417 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GAB1Q13480 694 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 UBAP2LQ14157 1087 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 DPY19L1Q2PZI1 675 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TIGD2Q4W5G0 525 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TCTN3Q6NUS6 607 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 BLOC1S3Q6QNY0 202 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 HSDL2Q6YN16 418 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RNF111Q6ZNA4 994 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GK5Q6ZS86 529 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR7G1Q8NGA0 311 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR8K3Q8NH51 312 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 THAP3Q8WTV1 239 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR5P2Q8WZ92 322 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ADIPOR1Q96A54 375 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 VPS33AQ96AX1 596 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ERP27Q96DN0 273 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GIMAP5Q96F15 307 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ART5Q96L15 291 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CCDC115Q96NT0 180 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SMAD5Q99717 465 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 INPP5KQ9BT40 448 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ITPAQ9BY32 194 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 WWTR1Q9GZV5 400 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SLC6A13Q9NSD5 602 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 FAM120CQ9NX05 1096 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CCDC167Q9P0B6 97 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 C19orf53Q9UNZ5 99 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PCDHGA9Q9Y5G4 932 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 BSNQ9UPA5 3926 aa11.51□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PRSS51A0A1B0GVH4 220 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 A8MUI8 341 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 DYRK3O43781 588 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ZFAND5O76080 213 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SLITRK5O94991 958 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 HOXB9P17482 250 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PTPN6P29350 595 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CD97P48960 835 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MLF1P58340 268 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 KCNAB2Q13303 367 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TLR1Q15399 786 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 AGKQ53H12 422 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ACER2Q5QJU3 275 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 EXOSC6Q5RKV6 272 aaKnown RBP11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ZNF468Q5VIY5 522 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 IGFL2Q6UWQ7 119 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NPSR1Q6W5P4 371 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CPLX4Q7Z7G2 160 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CLEC4FQ8N1N0 589 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NATD1Q8N6N6 113 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ZFP28Q8NHY6 868 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NUBPLQ8TB37 319 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 HOXB13Q92826 284 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 FAM120BQ96EK7 910 aaKnown RBP11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ABHD17AQ96GS6 310 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 VSTM2LQ96N03 204 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CCT8L2Q96SF2 557 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ZBTB18Q99592 522 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SLC25A23Q9BV35 468 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 DEFB126Q9BYW3 111 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NSRP1Q9H0G5 558 aaKnown RBP11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CDCP1Q9H5V8 836 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 COPS7AQ9UBW8 275 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 BTNL2Q9UIR0 455 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TRIM33Q9UPN9 1127 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CSAG2Q9Y5P2 127 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 HEMK1Q9Y5R4 338 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PIEZO2Q9H5I5 2752 aa11.5□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ATRXP46100 2492 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 IGSF10Q6WRI0 2623 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 EXPH5Q8NEV8 1989 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR6C76A6NM76 312 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MKRN2OSH3BPM6 223 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ERVH48-1M5A8F1 160 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 WWP2O00308 870 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 NR5A2O00482 541 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 FCHO1O14526 889 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 PRAMEF2O60811 474 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 FAM107AO95990 144 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 IL6P05231 212 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 DDX5P17844 614 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GPC1P35052 558 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MAP3K8P41279 467 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 AP2B1P63010 937 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 KLF10Q13118 480 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 MFAP5Q13361 173 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 GTDC1Q4AE62 458 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 CRB2Q5IJ48 1285 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 SLC2A7Q6PXP3 512 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 LYPD8Q6UX82 237 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 ISLR2Q6UXK2 745 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 TMEM64Q6YI46 380 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 LINC00696Q6ZRV3 163 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 WDR53Q7Z5U6 358 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RETREG3Q86VR2 466 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 RPS19BP1Q86WX3 136 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 LGI4Q8N135 537 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 BEST3Q8N1M1 668 aa11.49□□□□□ -0.57
HLA-DQB1-203ENST00000399082 OR5AK3PQ8NH89 298 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms