RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 KLHL22Q53GT1 634 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 CRB2Q5IJ48 1285 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 IQCHQ86VS3 1027 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 C9orf62Q8N4C0 152 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 OR11H4Q8NGC9 324 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 OR8J1Q8NGP2 316 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 XAGE5Q8WWM1 108 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 RNFT2Q96EX2 444 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SIPA1Q96FS4 1042 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SENP5Q96HI0 755 aaPredicted RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 HYLS1Q96M11 299 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ZFP3Q96NJ6 502 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 OR4K3Q96R72 315 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 TMEM245Q9H330 911 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 KCNK12Q9HB15 430 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 PAK6Q9NQU5 681 aaPredicted RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 TRPC4Q9UBN4 977 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 CLEC4EQ9ULY5 219 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ZFR2Q9UPR6 939 aaKnown RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 A0A1W2PP55 124 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ARHGEF33A8MVX0 844 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 E9PQ18 207 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ATP6V1G2-DDX39BF2Z307 99 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 RAB36O95755 333 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 H1F0P07305 194 aaKnown RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 OR12D1P0DN82 309 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 POLR2CP19387 275 aaPredicted RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 LHCGRP22888 699 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC6A12P48065 614 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 DSTNP60981 165 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 PLAURQ03405 335 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 TNK1Q13470 666 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 PRSS53Q2L4Q9 553 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SYT14P1Q58G82 188 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 TCTN3Q6NUS6 607 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 BHLHB9Q6PI77 547 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 HSDL2Q6YN16 418 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 GDPGP1Q6ZNW5 385 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 COMMD6Q7Z4G1 85 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 OR52N2Q8NGI0 321 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 UFD1Q92890 307 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 NEIL2Q969S2 332 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 MSLNLQ96KJ4 702 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC22A12Q96S37 553 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 TGIF2Q9GZN2 237 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ABCG4Q9H172 646 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 ZDHHC6Q9H6R6 413 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 KLHL1Q9NR64 748 aa9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 MRPL15Q9P015 296 aaKnown RBP9.35□□□□□ -0.91
PTCHD4-202ENST00000398738 TRPM7Q96QT4 1865 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 A0A1W2PPK0 400 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 FRS3O43559 492 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 EPHX1P07099 455 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 ALPPL2P10696 532 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 DRD5P21918 477 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 ITGB7P26010 798 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 TIA1P31483 386 aaKnown RBP eCLIP9.34□□□□□ -0.915e-7■■■■□ 21
PTCHD4-202ENST00000398738 ASMTP46597 345 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 WNT4P56705 351 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 GPR176Q14439 515 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 MPEG1Q2M385 716 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 TEX261Q6UWH6 196 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 ADGRD2Q7Z7M1 963 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 TMEM173Q86WV6 379 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF655Q8N720 491 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 OR4D11Q8NGI4 311 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 ARMC5Q96C12 935 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 TMEM19Q96HH6 336 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 GTPBP2Q9BX10 602 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 REEP4Q9H6H4 257 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 RDH8Q9NYR8 311 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 PTGFRNQ9P2B2 879 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 RABL2AQ9UBK7 228 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 REV1Q9UBZ9 1251 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 SEC14L3Q9UDX4 400 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 BTNL2Q9UIR0 455 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 SCML1Q9UN30 329 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 U3KQ87 197 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 ZSWIM8A7E2V4 1837 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 HNRNPCL2B2RXH8 293 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 CA12O43570 354 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 SGTAO43765 313 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 STATHP02808 62 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 C8GP07360 202 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 IL3P08700 152 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 PEPDP12955 493 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 PTX3P26022 381 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 ELAVL4P26378 380 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 OR1D2P34982 312 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 AP2S1P53680 142 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 PER3P56645 1201 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 SNTA1Q13424 505 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF628Q5EBL2 1059 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 FAM27D1Q5T7N8 215 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 MSANTD1Q6ZTZ1 278 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 GPR155Q7Z3F1 870 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 RTN4RL1Q86UN2 441 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 HORMAD2Q8N7B1 307 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 CLDN22Q8N7P3 220 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 WDR20Q8TBZ3 569 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms