RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SLC6A16Q9GZN6 736 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 IFT46Q9NQC8 304 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 ACTR10Q9NZ32 417 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 C2orf92A0A1B0GVN3 265 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 NOS1APO75052 506 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 CYB5AP00167 134 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 IGLV3-27P01718 113 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 MMP2P08253 660 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 MMP12P39900 470 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 PRDX1Q06830 199 aaKnown RBP13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 MBTPS1Q14703 1052 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 LRIT3Q3SXY7 679 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 Q6ZSR6 202 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 MFSD6LQ8IWD5 586 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 TOMM5Q8N4H5 51 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 ACBD7Q8N6N7 88 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 DOK4Q8TEW6 326 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 CD207Q9UJ71 328 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 CA14Q9ULX7 337 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 PCDHGB6Q9Y5F9 930 aa13.51□□□□□ -0.25
PCDHGA11-201ENST00000398587 KIR2DS5A0A0G2JLQ3 304 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 A0A0G2JNG1 304 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 A0A1W2PRG6 482 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 TRAPPC13A5PLN9 417 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 KIR2DS3K7RE56 304 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLITRK5O94991 958 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 CLDN2P57739 230 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 PLCXD2Q0VAA5 305 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 KIR2DS5Q14953 304 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 ANKDD1AQ495B1 522 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 GTF2IRD2BQ6EKJ0 949 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 GTF2IRD2Q86UP8 949 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 LHFPL3Q86UP9 236 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 PEX11GQ96HA9 241 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLAMF8Q9P0V8 285 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 LAMP5Q9UJQ1 280 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 CMAHPQ9Y471 501 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 ST14Q9Y5Y6 855 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 GXYLT2A0PJZ3 443 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 A6NHS1 94 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 PEX12O00623 359 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 FLRT2O43155 660 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 IMPA1P29218 277 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 CRYZQ08257 329 aaKnown RBP13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 HNRNPA0Q13151 305 aaKnown RBP13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 SNTA1Q13424 505 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 LSAMPQ13449 338 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 KEAP1Q14145 624 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 TLDC1Q6P9B6 456 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 TTLL10Q6ZVT0 673 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 USP53Q70EK8 1073 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 RPLP0P6Q8NHW5 317 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 A0A1B0GVT2 93 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 CLCA1A8K7I4 914 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 FOXE1O00358 373 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 NUDT1P36639 197 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 CDK5R2Q13319 367 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 GBX1Q14549 363 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 RBM12BQ8IXT5 1001 aaKnown RBP13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 FAM86B1Q8N7N1 296 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR6N1Q8NGY5 312 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 ARRDC3Q96B67 414 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 GPR78Q96P69 363 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 CMKLR1Q99788 373 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 SORBS1Q9BX66 1292 aaKnown RBP13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 NMNAT1Q9HAN9 279 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 NUP205Q92621 2012 aa13.5□□□□□ -0.25
PCDHGA11-201ENST00000398587 UBFD1O14562 309 aaKnown RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 HMGN2P05204 90 aaKnown RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 HSD11B1P28845 292 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 AFMIDQ63HM1 303 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 UGT2A3Q6UWM9 527 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 CBLL1Q75N03 491 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 TRIM46Q7Z4K8 759 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 NEIL3Q8TAT5 605 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 TRUB1Q8WWH5 349 aaKnown RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 LINC01599Q8WXQ3 324 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 NSMAFQ92636 917 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF559Q9BR84 538 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 COL24A1Q17RW2 1714 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 RNF13O43567 381 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 TACR1P25103 407 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 PMS2P3Q13401 168 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 TRAM1Q15629 374 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 TMEM236Q5W0B7 351 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 SDR16C5Q8N3Y7 309 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 H3BQ06 376 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 CASC3O15234 703 aaKnown RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 MRPS14O60783 128 aaKnown RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 CR2P20023 1033 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 CBLP22681 906 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 MC3RP41968 323 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 GPR4P46093 362 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 PIN1Q13526 163 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 RPS26P11Q5JNZ5 115 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 ARHGAP11AQ6P4F7 1023 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 HIST1H2AAQ96QV6 131 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 EPHX3Q9H6B9 360 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 EPHA6Q9UF33 1036 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZFR2Q9UPR6 939 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms